FastQCFastQC Report
Wed 31 Aug 2022
EGAF00003671908

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00003671908
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences20
Sequences flagged as poor quality0
Sequence length100
%GC42

[OK]Per base sequence quality

Per base quality graph

[FAIL]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[FAIL]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[FAIL]Overrepresented sequences

SequenceCountPercentagePossible Source
TATTTAGGGGCAAATTTAAAGACAGCTAGACTGATTAGGCGTATAGGATT315.0No Hit
AAGCGGCGCCGGACCGGGCTGAAACGGGCGTTGCTGGACCAATCCCTGAT210.0No Hit
CATCAGAAAGATGATCAATCTTTCTAGATGGAGTGAATATTTGAATAAAA210.0No Hit
TGCTGCACGTATGCAGCAAGACATTGAAAAAATCTGCGCAACAGAAATTT210.0No Hit
GCTCGGTCCACTCCCAAACCATGGAGTGTACTTTCGTTTTCGATAAATCC210.0No Hit
GTACATTACCCGCAGAACCTGCGCCAATAATAATATAATCGTAGTGTTGA15.0No Hit
GGGGATGAGCGTGTCGCGAGCGAAAGCGTCGCGGCGCAACCCGCGCCTGC15.0No Hit
ATATGATATCGTGGTTTTTCCCGAATGAAATGAAGGGCGCACTTATCCAT15.0No Hit
GGTGTTGCTTAATCACATCAATCAGTTGGTTTTCATCAACAGGCTTAGTT15.0No Hit
GAATTCATTCCTCATAAACCAATTCCATCGGAGCAATTCAATATGGACTG15.0No Hit
ACGCACAGCTTGGTTGAACTCTTCACCTGCGTAAGTATCAATCCACGCTT15.0No Hit
AGGTGGCGTTGAGCATCTGTTATTCTGGAAAAAATATCTAATGTATTGGG15.0No Hit
CTACAAAATATCATGCTTGAGAAAAAACAATCTTCATCAAGTCACATCTG15.0No Hit
TCACTTAATATATGTAAGCTAAATACAGCAAATTGCCTGCAATTACGTCA15.0No Hit

[OK]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)