FastQCFastQC Report
Wed 31 Aug 2022
EGAF00003671910

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00003671910
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences16
Sequences flagged as poor quality0
Sequence length100
%GC42

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[FAIL]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[FAIL]Overrepresented sequences

SequenceCountPercentagePossible Source
ATGAAAGAGCAGTAGTGAATCAATATGAAGTTTTTGTTCGAAGAATAACC212.5No Hit
ATGCTGCGTGACGTTTGCGCACCGAAATTACAACAACTTGGCGATATCGT16.25No Hit
TGCAAAGTCTTGGCATACTCTTGTGCAGCGCCTAGCCCCATCAAGGCTGG16.25No Hit
CCCATGATTGGGTCAACAATTTTGATCCCTGCATTGAGGTATTCAAGATC16.25No Hit
GTGCCCACCTCGACGCCCGGGTTCTCGGCCACGCTCATCCACACCTGTCT16.25No Hit
TAACATAAATGCTTGCTGCTGACGAACAGGAAGACCCGCAATGGCTTCTT16.25No Hit
TCGCCGAGCTGGCCGAGGCGCTCCGGCGACGTGACCAGCACGCGCACATC16.25No Hit
ACTATAATCTGGAAAAAGATAACTAGACAGTAGTGATTTTTTTTTTTTTT16.25No Hit
GAAGACCTCTAAGTTAGAAAACTTAAATGCTGAGATGTATAAAGATGGAA16.25No Hit
CGCTTCAGGTTTACCAGAGCGAGATATTCCAGAGCTATTTCAAACTGAAG16.25No Hit
GATTTACAGCAGTTGGTCGATGACCAACAACTTTCTCGTCAGGATGTTCT16.25No Hit
GTGTACGGTACAGCCATGCAGTTGATCGCCAGTATTCAAGACGCGCTGAT16.25No Hit
CTTCAGATTTCAGTATCTAAACAGGCTAAGTTACTGAAAGTCTCTCGTGG16.25No Hit
CTACAAGGTTGGCTGCCCATTGGAAACACTTGTGGAATTTTAAAGAGATA16.25No Hit
CCATCCCTAGTCAACAACCCGGGAGAATTTTCAAGCATTTCTTGGTACCC16.25No Hit

[WARN]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)