FastQCFastQC Report
Tue 10 May 2022
EGAF00003672072

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00003672072
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences45476
Sequences flagged as poor quality0
Sequence length100
%GC53

[OK]Per base sequence quality

Per base quality graph

[FAIL]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[WARN]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[WARN]Sequence Duplication Levels

Duplication level graph

[WARN]Overrepresented sequences

SequenceCountPercentagePossible Source
GTATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT810.1781159292813792No Hit
GTACATGGGACGCCTCCTCCAAGTCCCAGCGAACCCGCGTGCAACCTGTC510.11214706658457209No Hit
TATTTATAGAGTCTGGTGAACTTGAACTAGAGAAAGCTGCAAAAAGTGGT500.1099481044946785No Hit
GTACATGGGAAAGCGATCTCTTCTGAGGATCCGGCAAGATGGCAGAAGTA460.10115225613510424No Hit

[OK]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)