FastQCFastQC Report
Thu 1 Sep 2022
EGAF00003672073

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00003672073
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences4513
Sequences flagged as poor quality0
Sequence length100
%GC52

[OK]Per base sequence quality

Per base quality graph

[FAIL]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[WARN]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[WARN]Overrepresented sequences

SequenceCountPercentagePossible Source
GTATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT190.42100598271659645No Hit
GGTATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT150.3323731442499446No Hit
CCTCTAGATAGTCAAGTTCGACCGTCTTCTCAGCGCTCCGCCAGGGCCGT110.2437403057832927No Hit
GTATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTG110.2437403057832927No Hit
TCTTTGCATTGTTCCTCATCCGCCTCCTTGCTCGCCGCAGCCGCCTCCGC90.1994238865499668No Hit
GTACATGGGGCAGTGGTATCAACGCAAAAAAAAAAAAAAAAAAAAAAAAA80.17726567693330378No Hit
GTACATGGGTCTGTGATGCCCTTAGATGTCCGGGGCTGCACGCGCGCTAC70.15510746731664082No Hit
CTCCACAGATACCCCGAAGCCATGGCAAGCAAGGGCTTGCAGGACCTGAA70.15510746731664082No Hit
CCCCGAAGCCATGGCAAGCAAGGGCTTGCAGGACCTGAAGCAACAGGTGG70.15510746731664082No Hit
TATCAACGCAGAGTACATGGGGCAGTGGTATCAACGCAAAAAAAAAAAAA70.15510746731664082No Hit
TATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT70.15510746731664082No Hit
GTCTAGTCATCCTCGTCGGTCTTCTGCTTCTTGGTATCGACATCGTCATC70.15510746731664082No Hit
GTTCCTCATCCGCCTCCTTGCTCGCCGCAGCCGCCTCCGCCGCGCGCCTC70.15510746731664082No Hit
GTACATGGGCAGTGGTATCAACGCAAAAAAAAAAAAAAAAAAAAAAAAAA60.13294925769997784No Hit
CAGACGCAGAGTACATGGGGACTCTGGGCAGGATCCAACGTCGCTCCAGC60.13294925769997784No Hit
GTATCAACGCAGAGTACATGGGGCAGTGGTATCAACGCAAAAAAAAAAAA60.13294925769997784No Hit
GTGCTAGATGGCGCCTGGAAGGGGGGTCACCCAAGTCTCCCTGCTGTCAT60.13294925769997784No Hit
CTCCTGCACCTGCGCCGGCTCCTGCAAATGCAAAGAGTGCAAATGCACCT60.13294925769997784No Hit
ACTCTAGCCGCCTCTTCAGCTCGCCATGGATCCCAACTGCTCCTGCGCCG60.13294925769997784No Hit
GGGCCAGGCTGTGCTAGATGGCGCCTGGAAGGGGGGTCACCCAAGTCTCC60.13294925769997784No Hit
CTTCCAAAGTGGTCTACAACTTTTCTAAAAGTGTCTCTCAGTTGTTGCTG60.13294925769997784No Hit
GCCCCCAGGAAGGTGACATACTCCTGGAAGTTCACCTCCTGGTCCTTGTT50.11079104808331486No Hit
TTCTTAGCCTTCCCACTCCCGCCCTCTCTCAAGCTCCGGTGCCCACAAGC50.11079104808331486No Hit
CTACACTGACTGGCTCAGCGTGTGCCTACCCTACGCCGGCAGGCGCGGGT50.11079104808331486No Hit
GTACATGGGTGGGAGAAGGGAGGTGACTCCGGCGGAAGAGGACAAGGCAG50.11079104808331486No Hit
GTACATAAAAAATCCAGGTTTGTGGAAGTCGCGTTCTTTACATCTGGGAG50.11079104808331486No Hit
ATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT50.11079104808331486No Hit
GTCCCTGAACTCTCGCTTTCTTTTTAATCCCCTGCATCGGATCACCGGCG50.11079104808331486No Hit
TCAGGAGGCCGACCCAAGTCTCCCTGCTGTCATTTCAGGAGGCCGAATTT50.11079104808331486No Hit
GTACATGGGACTGGCTGCTCTGAAAAGCCATCTTTGCATTGTTCCTCATC50.11079104808331486No Hit
ACGCAGAGTACATGGGGCAGTGGTATCAACGCAAAAAAAAAAAAAAAAAA50.11079104808331486No Hit
GTCAGCCTCCTGCTCCCCATTTTCCTCATTAGCATTCCCGTTAGCAGGGG50.11079104808331486No Hit
CTCCTGGAAGGTCCCGAGCGCGACACCATGTCGGAGCCCGGGGGCGGCGG50.11079104808331486No Hit
GCCGGTGACTCCTGCACCTGCGCCGGCTCCTGCAAATGCAAAGAGTGCAA50.11079104808331486No Hit
GTATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTGG50.11079104808331486No Hit
GTACATGGGGTGCCGGCAAGATGGCTGCGCCCGAGAAGATGACGTTTCCC50.11079104808331486No Hit
GAATATAGCAAACGGTCACGGTCAGGGTTGTACATAAAAAATCCAGGTTT50.11079104808331486No Hit
GTACATGGGTGGCCAGGTGCGGTGGCTCGTGCCTGTAATCCCAGCACTTT50.11079104808331486No Hit
ATCCAACGTCGCTCCAGCTGCTCTTGACGACTCCACAGATACCCCGAAGC50.11079104808331486No Hit
GTCTTGGCCAGCTGGTCCATGGCTTTCTGCCCCGCCTCTGTGGCCTGGTC50.11079104808331486No Hit

[OK]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)