FastQCFastQC Report
Thu 1 Sep 2022
EGAF00003672075

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00003672075
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences4526
Sequences flagged as poor quality0
Sequence length100
%GC52

[OK]Per base sequence quality

Per base quality graph

[FAIL]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[WARN]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[WARN]Overrepresented sequences

SequenceCountPercentagePossible Source
GGTATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT160.3535130357931949No Hit
GTACATGGGGCAGTGGTATCAACGCAAAAAAAAAAAAAAAAAAAAAAAAA140.30932390631904555No Hit
GTTCCTCATCCGCCTCCTTGCTCGCCGCAGCCGCCTCCGCCGCGCGCCTC130.28722934158197083No Hit
TATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT120.26513477684489617No Hit
GTATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT120.26513477684489617No Hit
GTACATGGGGTGCGCGACCTGCACACCGGCACCGACGCCGCGCGGCTGAT80.17675651789659744No Hit
GTACATGGGAGTCTGGGACGCGCCGCCGCCATGATCATCCCTGTACGCTG80.17675651789659744No Hit
GTCTCACTCTGTGCAGTGGCACGATCTTGGCTCACTGCAACCTCCACCTT80.17675651789659744No Hit
GTGCTAGATGGCGCCTGGAAGGGGGGTCACCCAAGTCTCCCTGCTGTCAT80.17675651789659744No Hit
ATTTTAATGAGGGGGCAGACCGAGGAGGTGGTGGCTGCCCGGAGATCAGG80.17675651789659744No Hit
GGCCACAGAGGCGGGGCAGAAAGCCATGGACCAGCTGGCCAAGACCACCC70.15466195315952277No Hit
GTACAGGATGTTGTCAACGATGCCGCCCTTCAGGTACAACGGGATGTCAT70.15466195315952277No Hit
GTATCAACGCAGAGTACATGGGGCAGTGGTATCAACGCAAAAAAAAAAAA70.15466195315952277No Hit
CGTCCAGGCTGCTGCGCTTGCTCACCGTGCGCCCGAAGATGTCGATGCGG60.13256738842244808No Hit
TCCTTGTTCCGGTCCAAGTCTTCCATCAGCCTTGCAATTTCAGCATCCTG60.13256738842244808No Hit
ATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT60.13256738842244808No Hit
TCTTTGCATTGTTCCTCATCCGCCTCCTTGCTCGCCGCAGCCGCCTCCGC60.13256738842244808No Hit
GTACATGGGGAGTCTGCGGTGGGCTAGCGGACGGTCCGGCTTCCGGCGGC60.13256738842244808No Hit
CTCCTGGAAGGTCCCGAGCGCGACACCATGTCGGAGCCCGGGGGCGGCGG60.13256738842244808No Hit
GTATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTGG60.13256738842244808No Hit
GTATCAACGCAGAGTACATGGGTCTGTGATGCCCTTAGATGTCCGGGGCT60.13256738842244808No Hit
GGGGCAGACCGAGGAGGTGGTGGCTGCCCGGAGATCAGGGCCAGGCTGTG50.11047282368537341No Hit
ACATGGGACTGGCTGCTCTGAAAAGCCATCTTTGCATTGTTCCTCATCCG50.11047282368537341No Hit
GCATTGTTCCTCATCCGCCTCCTTGCTCGCCGCAGCCGCCTCCGCCGCGC50.11047282368537341No Hit
GCTGGGACGGGAGTCCCGGCGGCGGCAGCTCCAAGTCCATCATGATGAGC50.11047282368537341No Hit
GTCTAGTCATCCTCGTCGGTCTTCTGCTTCTTGGTATCGACATCGTCATC50.11047282368537341No Hit
GTACATGGGACTGGCTGCTCTGAAAAGCCATCTTTGCATTGTTCCTCATC50.11047282368537341No Hit
TCCATCTGTTGGCTGACTGGAATGGCCTTGGTTTCTGTGGGATTCATACT50.11047282368537341No Hit
GTCTACAACTTTTCTAAAAGTGTCTCTCAGTTGTTGCTGGTCAGCCACAT50.11047282368537341No Hit
ATCAACGCAGAGTACATGGGACTCTGGGCAGGATCCAACGTCGCTCCAGC50.11047282368537341No Hit
GTGTGGACCTGCGGGTCCGAAAGGAACTTGCGCATCTGCTCCAGGGCGCT50.11047282368537341No Hit
TATCAACGCAGAGTACATGGGGTGGTATCAACGCAAAAAAAAAAAAAAAA50.11047282368537341No Hit
ATTTCATAGAAAAAGGAATATAGCAAACGGTCACGGTCAGGGTTGTACAT50.11047282368537341No Hit
TGCATGAATTTCAGACCAACAAGGCGGAATCCTTTCTGCTCAAAACGCTT50.11047282368537341No Hit
ATCCAACGTCGCTCCAGCTGCTCTTGACGACTCCACAGATACCCCGAAGC50.11047282368537341No Hit
GTATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTA50.11047282368537341No Hit
TTCTCAGGCTCCCTCTCCGGAATCGAACCCTGATTCCCCGTCACCCGTGG50.11047282368537341No Hit

[WARN]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)