FastQCFastQC Report
Wed 31 Aug 2022
EGAF00003672177

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00003672177
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences23
Sequences flagged as poor quality0
Sequence length100
%GC61

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[FAIL]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[FAIL]Overrepresented sequences

SequenceCountPercentagePossible Source
AGTCAGCTCATACTAAAGAAGAACAAGTTTGTTCCCAGGGCATTCATCAA313.043478260869565No Hit
CGGCAGCAGCGCCTCCGCCTGCTGGGCAGCGGAGCCCTCGGGCACGTCCA28.695652173913043No Hit
GGGCAGCGTCCCCTAGTAGCGACTCGTGCATATTGAGTAGGTCAGCCCGT14.3478260869565215No Hit
GGGCTCGTCGGAGTCGGGTCAGCGGTTCCAGAGGCCGTAGGTCGCGGCGA14.3478260869565215No Hit
ACATCTTATATTAAAAAACAGAGGAAGTATGTCTTATTTCTGCTTACTAA14.3478260869565215No Hit
GGTCCTGGTCGACGGGGTCCCAGTCGAGGGTGATCGGCCGGGGGTAGTGA14.3478260869565215No Hit
GCTGGTCACCATCCTCGGAGTGGGTACCATCAAAGTCGCGATCGACCAAG14.3478260869565215No Hit
CTATGCCGGTGTTGAAATAGTCAATCTTGGAGAACATTGAAAACAGCGAA14.3478260869565215No Hit
GCGACACGCTAACCGAGGTGATCGCCAATGGCGACGCCATCAACCACGCA14.3478260869565215No Hit
CGTCGTCCCCGCGGGCCGGGTCCTCGTCGGGCGTCTCGGCGCCCAGACCC14.3478260869565215No Hit
ATGCTCGGCACCTTCTCGTAGTACTTGTTTGCGGCCTCACGAGCCTGGAA14.3478260869565215No Hit
CATGTAGAGGATCTGGTCACCGTCGAGTGTGAGCTCCATCAGCACGTTCG14.3478260869565215No Hit
ATTTCCCCATCTCCGCCGCCGCACGCCACCGCCAAATCGCGAGCTCCGGC14.3478260869565215No Hit
GTTGTGCAGGCCGAGCCGGCCGACGAGGTTGCGCAGCCGCTTCTCCTCCG14.3478260869565215No Hit
ATTCCAGTGGTTTAAAAGTGGGTATTACACGACACAATCAAATGCCAACC14.3478260869565215No Hit
GGTGTGAGCCGCCGGGGTCCGGACCGGGCGGGCTCCCCCTACGACGGCGT14.3478260869565215No Hit
GTGCCGGATCGCCTCAAGGCTGTTGGCGAGCGCCTGGCCGTAGGTGTCGT14.3478260869565215No Hit
GGTCACCTCGTCACCGGTGCCACCGGCGTCTCCGGGGTCTCCGGCCGGAC14.3478260869565215No Hit
TCCCTGGAGTTTGGCTGTCCAATGGCCTACCTCTCCTACCTGTATGCCCC14.3478260869565215No Hit
CTCCAGGTAGGCACGCGCCTTGTGGCCCTGCACTTCGCCGTCGCTGGCGA14.3478260869565215No Hit

[OK]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)