FastQCFastQC Report
Wed 31 Aug 2022
EGAF00003672178

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00003672178
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences23
Sequences flagged as poor quality0
Sequence length100
%GC63

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[FAIL]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[FAIL]Overrepresented sequences

SequenceCountPercentagePossible Source
ATTCAATGACATGTTATGAATGCAAAGTTTTTAATTTTTGTGAAAATTAG313.043478260869565No Hit
GCACGAGGAGCTGCTGGCGACCGTCCCGGCCTACGCCGACCTGGTCACCG14.3478260869565215No Hit
TCGGCGACCCGTGGGAGGGCGAGGTCCCCGTAGAGCGGGTGGCGTCGGTC14.3478260869565215No Hit
CAACGCGACCTGCGCCGCCGACGCGGACATCGTCATCGCGGCGCTGCCGC14.3478260869565215No Hit
GGCATGACCGGCAAGCTGACCCTGGATCCGGCCCAGATCGAGGCGATCAA14.3478260869565215No Hit
GGTGCAGGCGCTGCTGGGCGCGCAGCAGCAACAGCAGGCGGCGCTCACCC14.3478260869565215No Hit
TCAACCACGCCCGACAGAAATCTACTCTGAGTTTCAAAAATAGGAATAGC14.3478260869565215No Hit
AGCCCCCCCCGTCGCCGGCGCGCCCGAGCGCTCCGAAGGAAGTTGGCCAA14.3478260869565215No Hit
CGGCCACGGCGCGGAACACGCGCTCGTTGCCCTCCACGTTCACGCGGCGC14.3478260869565215No Hit
CTCCTCGACCGTGCAGGAATGCCACGACCTGGCCCTCATCAGCCAGGCAG14.3478260869565215No Hit
CAACGCGACCTGCGCCGCCGACGCGGACATCGTCATCGCGGCGCTGCCGT14.3478260869565215No Hit
GCCGTGGTCGCCTCGACCGAGCGCACCCGGGAGGAGTGGCGGCACGCCCT14.3478260869565215No Hit
GGACCGAGCCAGGCCGAGCTAGAGCGAGCGCGCGCCCAGGTGGAACGAAG14.3478260869565215No Hit
GCGGTAGCTACCCGGAGCCTCGCCGCGTCGCTGCGCGCGACCTGGCGGCG14.3478260869565215No Hit
GTCGCACCTCGCGCACGCCGACGCGCCCGACCACCCCACGATCGACGTCC14.3478260869565215No Hit
GCATTCCTGTTTTCATGCCCAAATGTTGCCTTTTGGTCTGGAACGCCCCC14.3478260869565215No Hit
TCGTGGAGTGGTGGGTCGCCGAGAAGGCAGACTGGCAAGACTTTGACGAC14.3478260869565215No Hit
CTCCGTGTCCGCCGCTTCGCTGGCAAGCCAGAACAGCTCCTGCCGCTCAC14.3478260869565215No Hit
GCCTCGTCCTCTAGGAGGTAGACCCCCGCCTCGTCCTCTATCCCCGCCTT14.3478260869565215No Hit
GGCTGCACGACCGCGCCCGCCTGATCGCGGCCGCCTACCTCACCCGGTGC14.3478260869565215No Hit
CTCGAACAGCGCGTGGCCAGCCGGGGTGCGCCAATACCGATCTGCGGCGA14.3478260869565215No Hit

[OK]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)