FastQCFastQC Report
Wed 31 Aug 2022
EGAF00003672179

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00003672179
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences21
Sequences flagged as poor quality0
Sequence length100
%GC65

[OK]Per base sequence quality

Per base quality graph

[FAIL]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[FAIL]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[FAIL]Overrepresented sequences

SequenceCountPercentagePossible Source
GGCAACCACGCGCGCCGCGTCGACCACGAGCACCCGGTCGCAGCGCGCCG314.285714285714285No Hit
TATTGTCATCGAAGACAGCGAAATCAAAGATTTTTACGATGACAATCAAT314.285714285714285No Hit
AGACGGGCGTGAACGAACGTGCGGTCGCCAAGCCGCTCGACCACTTCCAC29.523809523809524No Hit
ATCTGGGCCCCGGCCGCGGTCACCGTGCTCGCCCTGCCGGCGTTCGCGCA14.761904761904762No Hit
GGCAGAGGACAAGATTCGCGGCCGTGCTGCTGGCAGCCCTTCTGGCAGGA14.761904761904762No Hit
GCGCGCGGCGGCGCCTCGGCTTCCGCACGTTCCCGGGGGTGACCGTGATC14.761904761904762No Hit
GCGCGCGGCGGCGCCTCGACTTCCGCACGTTCCCGGGGGTGACCGTGATC14.761904761904762No Hit
CACCCAACTGCCGTTATTGCCATTGCGCGATGTTGTCGTTTTTCCGCATA14.761904761904762No Hit
GTCTATGGCTACAGCAACTCGCAGGCCTTGCAGCGCTGCAGCGCATTGGG14.761904761904762No Hit
CTCCCTCTGCGGCGCGAGGACGCGCCAGGTTCGAGGCGGGGCTAACGACG14.761904761904762No Hit
AATGGAGTCTTCCCAATGAGCGATGCCTTTACCCTTGGTTGCCCCCACTG14.761904761904762No Hit
GTACCTGCACCGGGTAGCTGGTGCCGGAGAAGCGCGCCGAGAAGCTCACC14.761904761904762No Hit
GCCCCGGCCGCCACGGCGAGCCGCTCGGCCGGGGTGAGGCCGAGCACCGG14.761904761904762No Hit
AGGTTCGCGAGCTGATCGAGACCCACTCGCTGAATGAGAACGCAGACAAT14.761904761904762No Hit
CGCGACGGGGGCGCCGGCCGGCGTCGGCAGCGACCGCCGGCCGTACGGCA14.761904761904762No Hit
GGCTAAGCGGATCCATGCCGCTGCTCGGCTCAGTGCCGAGGAGCGCGACG14.761904761904762No Hit

[OK]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)