FastQCFastQC Report
Wed 31 Aug 2022
EGAF00003672180

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00003672180
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences21
Sequences flagged as poor quality0
Sequence length100
%GC66

[OK]Per base sequence quality

Per base quality graph

[WARN]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[FAIL]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[FAIL]Overrepresented sequences

SequenceCountPercentagePossible Source
TAGCCGATGTCCCCACCCAAATTACCGGTTGCGCTGTCGACCGAACGTTC314.285714285714285No Hit
GTGATGCCGACGTGCGTGGAGGACATCGAGCTCTCGCTGCGCCGCCGCGT314.285714285714285No Hit
CCTGGTGGTGGAAGTCGCGCCAGCACAGCCGCCGCACGAACTCCTCACTC29.523809523809524No Hit
GCGCGGCTGCACGAGCGCATGGCGTCGACGATGATCTTCGTCACCCACGA29.523809523809524No Hit
GCCCGCGCGGCAGCGCTCGGCGCCGCCGCCGCGCCGCTGGTGCCGAGGCT14.761904761904762No Hit
CTCCTGACTACCCGCGCTTTGCGCATCTTTGGTGGCAACCAGCGGCCGTC14.761904761904762No Hit
TTCCATGTAGATGTCTGAGAGCACAGCCGGAGAGACATTTATTGCACTCA14.761904761904762No Hit
CACCACGTCCTTGCCGTCGGGGACCGAACTGCCGCCGCCGCCGCATCCTG14.761904761904762No Hit
CACTTTTACCGTGCCATCGGGCAGCTTCAGCATTTGCAGGATATTGGCAA14.761904761904762No Hit
ACGCTGAGCTTCAGCCCGCCGGCCCGCGTGGAGGGCGAGAGCCCGCGCCG14.761904761904762No Hit
CCTCGCGGCCGGCGCCCTGGTCGGCGCCCTGTGCGTCGGCGGGCTCGTCT14.761904761904762No Hit
GGTGACGATGCCGACCAGACCAATCCACAAGCCCAGCGCGGGGCGGCGGG14.761904761904762No Hit
ACCGAAGACTTCTTCCACATGACCAGCCACCGCCCGTACCTGCTGCGGGC14.761904761904762No Hit
TCCTCGTGGTGGGTCTGATCCGCCTGCGGCAGGGCGCGGCGACCGTCGAG14.761904761904762No Hit
CTCCATCATCTTGCAGGGACCACACCAACTGGCCCAGAAATCGACCACCA14.761904761904762No Hit

[OK]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)