FastQCFastQC Report
Thu 1 Sep 2022
EGAF00003672271

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00003672271
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences61
Sequences flagged as poor quality0
Sequence length100
%GC61

[OK]Per base sequence quality

Per base quality graph

[FAIL]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[FAIL]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[FAIL]Overrepresented sequences

SequenceCountPercentagePossible Source
GTCTACTCCGGTGATGACCAGAACGTGCTGGCGTGGATGGCCATGGGTGC34.918032786885246No Hit
CACTGGATGCGCGTCAAGGCGATACGTAAGACAAAGCCGCGCACTGCCAA34.918032786885246No Hit
CCCCCCCCGGTGGCGCGAAGTCCGGCACGCGCGCCTTCCACGCGCGCACC23.278688524590164No Hit
GATCGGCGGGCTCGCCGCGCAGGTCGCCAAGCCGGGGGACTTCTTCACCT23.278688524590164No Hit
CACGGAAACAGACCTGTTGCGCCCAGATGACGACCAACACCGGATACTTC23.278688524590164No Hit
ATCGGTGACACGTCGATGATCCGTTACGACAATGCCAGGTGGGGCTTGGA23.278688524590164No Hit
GCGTGTCGCCGCCGTTCGCCGCGGGGATGTCGGTGGAGTCCGCTCTAATG23.278688524590164No Hit
GGGTGCTGCTGCTGTTCCCGGTGTGGATCGCGGTCGCGTTCCGCACCTAT23.278688524590164No Hit
CCCCGAGACCGCGCAGGGCCACTTCCTCAACTTCTCGCGCCTGCTCGAGT23.278688524590164No Hit
TTCTGTGCTTCTAGAAAACGATATGCAACAGAATAAAGATAGCGAGCGCT23.278688524590164No Hit
ATCAGCCCATCCGGAGCGCGACCCTCGATGCGCAGGCCCTCGCCGAGACG23.278688524590164No Hit
CTGGCGAAGAACGGTGGTATGAGAATTATTCGCCAGGACGATGGTAGCGA23.278688524590164No Hit
AGGCGCTGGTCTACGAACTCGATCTCGTCGGCGACGCGGTCGCAGAACAG23.278688524590164No Hit
ATCATCGTCTTCGAGCTGCTGAAGCCGCAGGTTCCCCCGCGTATGCGGGG23.278688524590164No Hit
GTTTAGCAAAGTCCTCACCAACAAATAGAAAGTTACTAGTTGGCTCGTCA23.278688524590164No Hit
GGGCAGCAGACTGCTGATGCAGCGCTCAGCAAACCGCCAATGGAGCTCGA11.639344262295082No Hit
CCGCCGGACCATCCCGACATCCGCCGCCTCGACCTCGAGCGCAGCCCGCG11.639344262295082No Hit
GTTATAGAGAGAAATCAGAACCACAGCGGTTCACTCAAATCGCCGACCTG11.639344262295082No Hit
CTGCAGGACTGGTTCGCCAACGAGATTGTGATGCCGATCTGATGACCAAG11.639344262295082No Hit
TCGTCAACCAGCACGGGAAGTTCACCGGCCACTGGAAATGGGTGAAGTAC11.639344262295082No Hit
GTTGGGACCAATTTCAGCAGCGGCCGTAGTGCCGATCTGTATCTGTGGCA11.639344262295082No Hit
ATGGATGGCGATCTCCATCACCGGCTCCAGCAGACGCGTGCCGGACTGTG11.639344262295082No Hit
CGTGTCGAACACGCTGGCCAACATCGAATCGCTGACCGGTTCGCTCGCGG11.639344262295082No Hit
CGCATGTTGCCAAGTGCAAATTTAATTTCGATATGCACCCACTAGCCCTT11.639344262295082No Hit
GTAGGTCTCGGCGCCGAGCTCCTTGGCCAGGATGAGGGTGTCGGCGATGT11.639344262295082No Hit
TCCGCTGTGCGAGCAGGTGCGCCATGACGGGGCCGACGCGCTGCGCGAGC11.639344262295082No Hit
TCGCTGACCAGTCATATGCCTCGCCAGTTTGATCATCGCACCAGCTTTCT11.639344262295082No Hit
GGTTTGCGCAGGGAGGCCAAACCCCGCCGGTGCCGGATGCGGTGCGCCTG11.639344262295082No Hit
ACATTGCTAACTCAGTCAGATAAAATGTTTCTTAAATACCAATTATGTGC11.639344262295082No Hit
GTCTACCGGCTGGGGCTGCAGTCGAACTGGGATGCCAGCTGGTGGCAGAC11.639344262295082No Hit
GTGTTCTAGTTTGGCACACTGTCGGTTGAGTGATGGCTCCCCGGCCTGAA11.639344262295082No Hit
GATCTTGTCGCCTATGCCGCCGAACACGGGCACGCGAGCCCTGGCCCCGA11.639344262295082No Hit
CATTTACACAGGGAGATATGGCGACTCTCAGAGATCTCGGACTTTCGGAG11.639344262295082No Hit
GTGTTCGACCACATCCGCCGGGGATTGGCCGAGCAGGTCCGCAAGGCCCG11.639344262295082No Hit
CATAACACCCCTTGTTTGCCTGGCGGCAGTAGCGCGGTGGTCCCACCTGA11.639344262295082No Hit
GTGGAGGCCTCTCAGAAATCTGACAGACCCTGCTGGGGTAGTGATTTTGA11.639344262295082No Hit
GGGCAAGGGCATCGTCAACTCCATTTCCATGAAGGAAGGCGTCGAGCAGT11.639344262295082No Hit
ATCAGCTTCCGTGTGATGGCGGCTTCGCGTTCGAATTCGGCAAGTATCGA11.639344262295082No Hit
GAACGGCGCCTCGCGGATCGCGCCGAGCGTGACGGCGGCGCCGTCGCGTG11.639344262295082No Hit
GCACACCCCCATATGGGATCCGTAGGGAAGCGCGACAACGGCCAGGTCGC11.639344262295082No Hit
CCATGCTGCGCGCGCACGCGCAGGCCGAGAGCTACGCCCGGGCGCTGCCC11.639344262295082No Hit
TTCCTGCCGCGCTATCCGATGGGGCGATTGAACACGGTCGACGATGTGGC11.639344262295082No Hit
CCCTAGAGCCGACGCCGGAGGAGCCCGAGTCCGCGGACACAAGGACCCAG11.639344262295082No Hit
GAGGTGACCCACATCGAGATTAATGATGAGACCGTCATGGGTGTGCGTCA11.639344262295082No Hit

[OK]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)