FastQCFastQC Report
Thu 1 Sep 2022
EGAF00003672272

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00003672272
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences61
Sequences flagged as poor quality0
Sequence length100
%GC62

[OK]Per base sequence quality

Per base quality graph

[FAIL]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[FAIL]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[FAIL]Overrepresented sequences

SequenceCountPercentagePossible Source
TCGCAGGTCGGTGAGGACGAGCTGCTGCTCGGCCTCATTGGCCTGCACCA34.918032786885246No Hit
AGGCCGTACAGACGGTGCCGGGAATGCTCGATCATCGTGAGCCCGAGGGC23.278688524590164No Hit
CTTCCAGCCTGACTTTCCCGCACGGCGAGCCGCCTTCGAAATCCTCTGGG23.278688524590164No Hit
ATTCGAGGCTTGGGGTAAAGATGAAGTTGCTATTTACCGTCTTGGTGATG23.278688524590164No Hit
CGCCCGGCCCGTCCGGCGAACGGCGCACCGACCGCGGCCACCCCGGCGCA23.278688524590164No Hit
GTGCTCGATCTCCGCCATGGTGAACTCGCGCACGCGCAGGAGGCCCGCGC23.278688524590164No Hit
GGGTTGTCCACCGACGGGTACGCGTGCGCCCAGCGGTGCGTACGCCGGTC23.278688524590164No Hit
GCCCGGCAACAGCCCCAACAAGTTCACGGAGGGTCAATCCCCGCATACGC23.278688524590164No Hit
GGGGAGTTCCCCGGGGTCAGGAACAGAATCGATGGTGTCGAGCACCTCCC23.278688524590164No Hit
CCAGCCGACTGAAGCAATTGGTCGATAGCTTCAAGATCTGATCCTGACTG23.278688524590164No Hit
TCGCTCTCCAAAGCATCCATTTCGAAGAGGTCCTTCTCGGGACGAGATAC23.278688524590164No Hit
GACGCACTTCATGAGGTCCGTGGAGTCCTGGTCGTCGTCATAGACAACAG23.278688524590164No Hit
GTGCTCGACCTCCTTGGCCAGACCAGAATCTCCGGCATACTCGGCGAGCA23.278688524590164No Hit
TGCCGACGATGATGGCTGTGACGATAGCGGCAAGATTGCCTGCCACAGCT23.278688524590164No Hit
ATCTGGCGCGCGCCCGCGAGACGGCCGCCGCCATCGCCCGCGCGCGCGGC23.278688524590164No Hit
CGCCGGAAGCGGTCCTGCTCTCGGCCTCCGAGCGAGCGCAGCGTGATGCA11.639344262295082No Hit
GAGCACGTCACGGCAAGCTGCACGTTGCGCTGTCACTGGCGCGTCCTTGC11.639344262295082No Hit
GGCCATCTCCTCCAGCATGGCGGCGGCGCCCGCCGGTTCCATGTCGGGGT11.639344262295082No Hit
CCGCGTCATCGGGGCCAGGGCTCGCGTGCCCGTGTTCGGCGGCATAGGCG11.639344262295082No Hit
CAGCAGAGAAAAGACTTTGAAGATGATTGCCTTAGGAGTTATTGAGCACA11.639344262295082No Hit
GTTCTAAGAGGAGATCAAGCGTCTCGCTGTCGCCCACAGCAGCCGTCCAG11.639344262295082No Hit
TCAGTGCCCTGGGCAGCGTTCATCGCATCTTCGCGAGCGTTATCCTGGTG11.639344262295082No Hit
CTGGATGTCCCGCTGAAAGTGGATTTTGCGTCCGGCCCTAGCTGGTATGA11.639344262295082No Hit
GGCTCGTGTGGCGGCCCCCCGTATGCCAAAAACGGGGGGCCCCACCCGCC11.639344262295082No Hit
CCTTCACGCACAGGGCGAGCAGGATGAACAAGGCGATGACACCGAGCAGC11.639344262295082No Hit
GTACGATCTTGCGATGGACACATCGATCATCCCGCAGGACCTCGTCATCG11.639344262295082No Hit
AAATAAAATAAAAAGGCCCTGATCAGCTACAGTTAGATTGGTCATCCCAA11.639344262295082No Hit
GAGCGACGGCGAGTGGCGCGACGACGCTGGGAGGTACCCCGCTCTGCCTC11.639344262295082No Hit
GGAACGACGAACCCAGTTCGTTGCTTTCCAGCTCGGTGCTGGAGAAAGCT11.639344262295082No Hit
GCCCGGACCCGATGACGAGAATGCGGTGCAGGTCGGTACGGCGGGGCATC11.639344262295082No Hit
ATCCCGAACTTCCCCATGTTGATTATCAGATCTGTATAAGTCTTGGGGCG11.639344262295082No Hit
GCGTATAACGAGCGCCCCCATGCAGGGTCAATAACGAGTCGGCCAAGCCG11.639344262295082No Hit
CCTCACGGTCACCCTCATCGACGGCCAGACCCATGCCAAGGACTCCTCGG11.639344262295082No Hit
TTGTCGCCCTTGCGTGCCACTCACCGCCACAACAATGCAGCACTTACATA11.639344262295082No Hit
CTGCCGAGTGCGCCGTGCAGTGCTATGCTCTCTGGTACGCTAATCTGCGT11.639344262295082No Hit
GGATTGGGTCTGACATGTCGGTAGTCCCCTAAATGGGGCCTTTGTTGCAT11.639344262295082No Hit
CCCTCAACGTCAAGGGTATTCCATTTTCCCCCTTCGGTACCTTCCTTGCC11.639344262295082No Hit
ACGGGGATCCAACGATCAGTGACGCTGCCGCCGTCGCTCACCTGCGTCGT11.639344262295082No Hit
GTGCGGGAAAAATCGGCGTACAGCTCCAGCGAGCGGCCCACGTCCACCAC11.639344262295082No Hit
TGTCGTAGCTGCGCTGGCAGATTTCCTTCTTGCGCGCGGCAGTGTCGGCC11.639344262295082No Hit
ACCTCAGGGAGGACCCCTGGGAGCGCGTGCGCAAGGTGCACGAGGCCGCG11.639344262295082No Hit
TGCCGACGATGATGGCTGTGACGATAGCGGCAAGATTGCCTGCCACAGAT11.639344262295082No Hit
TCAGCGTGCTGTCGAGCTTGCCCACCAGGCCGGGCAGCTTGTCGGCCAGC11.639344262295082No Hit
TTGTTGAGGACCGGCTTGTCAGAGTAGTAGAAATCCAAATCCTTGATCTC11.639344262295082No Hit
AGCCGGGACAGCCGATGCCGGACTGGGTGATGCGGGCCGACACGCTCGAG11.639344262295082No Hit

[OK]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)