FastQCFastQC Report
Thu 1 Sep 2022
EGAF00003672273

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00003672273
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences53
Sequences flagged as poor quality0
Sequence length100
%GC62

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[FAIL]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[FAIL]Overrepresented sequences

SequenceCountPercentagePossible Source
GTTTCAGATTTGCTGGCTGTACAAGTTGACCTTGGTGTGGGCGTGGAGGT35.660377358490567No Hit
GTCGGGTGCGGATCGGCGCGCAGCCAGATGCAGCCGTCGGGCTTGAGGCT23.7735849056603774No Hit
CTTTCAGCCTATCATCAGCTTGGCAGCAAGCCGAGTAGGGATGTAAGAAC23.7735849056603774No Hit
CTGTAGGGCAGGGAGATATCGTCCGCAATGCCGATATTGGGCTGACTTCA23.7735849056603774No Hit
CCATCCGTGCGAGGTAGCCGGTGGCGACGTTCGAGGGAACGATCCCATCG23.7735849056603774No Hit
ACCCAGCGCGGAGCACCCCGCGAGGCCGCGATGGGGGCGGGGGGCGCCGC23.7735849056603774No Hit
ATGCGCCGCTCGGCCGACGGGCGTTCCAGCAACCGCACCCACGCCATGCT23.7735849056603774No Hit
GCCGAGCTTCTCCTGTGGGACGACGCTCAACGTCAGAACTTGACCGACCT11.8867924528301887No Hit
CATCCGACCCGAAGAAACGGAGTCACAGCAGCAACCCTTAGTTATCAGTG11.8867924528301887No Hit
CCGTCATCGAGTGGGACAAGGACGATATCGACGCCCTGGGGCTGCTCAAG11.8867924528301887No Hit
TCGTCAACCAGCACGGGAAGTTCACCGGCCACTGGAAATGGGTGAAGTAC11.8867924528301887No Hit
CGAACGCCCAGCGCGTCGGCCGCAGCGCCGCCTCCACCCGCTCGACCAGC11.8867924528301887No Hit
TTTCCACGCCGTTCTGAACGAACAACGCCGCACTGGCGAACGACCTAGGT11.8867924528301887No Hit
TCTATATTCACTCCCGGCGGGATGGGATAGTGCGCTCGACGTGCTGAGAT11.8867924528301887No Hit
GCCCATGATGACGCCTCCATGGACACCTTTTATTTCTCCAACAATTGGTT11.8867924528301887No Hit
GGCAGGAGCTGCGCCAGCCCGGCCGGCCGCTGGCCACGGCTACCATCGTG11.8867924528301887No Hit
GGTTTGTTTACCGTTGGCAAACTCAACGATGGTGTCGATAAATTCTTCCA11.8867924528301887No Hit
TAGTGAGATAGATCCGTATGTGGGAGGAGTTAGGGATAACTTACAAGTCC11.8867924528301887No Hit
ATGCGGGAGTAGATTTGGGTTATTACCAAAATGCGTATGGGGGCGTGGAG11.8867924528301887No Hit
AACGAGGCGGGCACGAAGTTGTGCACGAACAGGAGCGGATCGATGATCCG11.8867924528301887No Hit
GGTATCGCAGCGGCGTCACCGGTCGGCCCAACCAGATTTTCGTGATGGGC11.8867924528301887No Hit
CACTGGATGCGCGTCAAGGCGATACGTAAGACAAAGCCGCGCACTGCCAA11.8867924528301887No Hit
GCGTGTCGCCGCCGTTCGCCGCGGGGATGTCGGTGGAGTCCGCTCTAATG11.8867924528301887No Hit
CGTCCTCGTCGGTCGCCTCGGGCGGGTGCAGGTGCTTCTCGAGACGGCGC11.8867924528301887No Hit
GCGGGCGATATTGCCGACTTCTACAATCTTCCAGTATGGCAAGCCGAGCT11.8867924528301887No Hit
GCAGGATGACATGACTGACCAGCGCAGCATCGACCTCAACAGCGACGTCG11.8867924528301887No Hit
GTCCGACGAGACGCCCGGTCCCGGAGGTCGACCCCGAGGTGCGCATGACG11.8867924528301887No Hit
CTCCATACCAGCTCATAGAGGAAGGTGGGATGAAAGGTCGCGTACTGAAG11.8867924528301887No Hit
GGTCAGACATCGCCCCGATCCGCTCAGCCCCGATCCGCTCACCTGCACCA11.8867924528301887No Hit
ATCAGCCCATCCGGAGCGCGACCCTCGATGCGCAGGCCCTCGCCGAGACG11.8867924528301887No Hit
ATGCGGTCCATCTTGTTGACGAACGCAATCAGCGGAACGCCGTGGCGACG11.8867924528301887No Hit
AGACTGATCCAATCGGCACACCACGCGAACTCGAGTACCCGAGATACTCG11.8867924528301887No Hit
GAACGGCGCCTCGCGGATCGCGCCGAGCGTGACGGCGGCGCCGTCGCGTG11.8867924528301887No Hit
ATGTCGAGCTGGCGGCTGGGGGCCGCGGTGGTTTCGTTGTTGCGGTAGGC11.8867924528301887No Hit
GTTCTCGTCCATGGGGACGTGCACGACGTCCGCCTGGCGCGCGCGGAACA11.8867924528301887No Hit
GTGCATCCGCCGCGCGAAGACGGCGAGCGCCTCCTCGCAGTCGGCGCACT11.8867924528301887No Hit
GCCAAGGCGCCTTGGCCGCCGCGGTCTTCGTCGTGGGCGTCTTCTTCGCC11.8867924528301887No Hit
GTCTGACGCTCAGTGGAACGACGCGCGCGTAACTCACGTTAAGGGATTTT11.8867924528301887No Hit
CGTCGACATCGCGCACCTGCGCTTCGAGATCAGCGACACCGGCATCGGCA11.8867924528301887No Hit
GTTCCGGGTTGGTCTCCCCTCCTGCGGGGGTGAAGCTGCCGGCGCGCCAG11.8867924528301887No Hit
GGCGCCGGGATCCTTCTCGGCCTCGGCGAAGAGCTGGGCCGCCGTTTTCT11.8867924528301887No Hit
ATCATCGTCTTCGAGCTGCTGAAGCCGCAGGTTCCCCCGCGTATGCGGGG11.8867924528301887No Hit
CGACAAGGATGTCGTTGTCGGGAGCAACCCCGGAATCGGGGCTGACTCCA11.8867924528301887No Hit
GCACATTGCGCTCCGGCTCGGCAGTGGCGAAGTGCTCGTCGACGGCGTGA11.8867924528301887No Hit
CCCTAGAGCCGACGCCGGAGGAGCCCGAGTCCGCGGACACAAGGACCCAG11.8867924528301887No Hit

[OK]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)