FastQCFastQC Report
Thu 1 Sep 2022
EGAF00003672351

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00003672351
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences79
Sequences flagged as poor quality0
Sequence length100
%GC59

[OK]Per base sequence quality

Per base quality graph

[FAIL]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[WARN]Per base sequence content

Per base sequence content

[FAIL]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[FAIL]Overrepresented sequences

SequenceCountPercentagePossible Source
CAACCTGCAAACGGACATTCGCCGCGCTGGCAACCCCGCTTGTCAGCAAG33.79746835443038No Hit
CTGAAGCTTATGCATAGGCCGACTACTCTAGAGTACTGGCTGGAGCAGCC22.5316455696202533No Hit
ATTCAGGATCGCGCGGCCACCTTCATCTTGTTCAAGATAGAGTGCCACAA22.5316455696202533No Hit
TTCGTCAACTGCGGCTGGGAGTGGCTGCCGCGCCGACGCAAGGCGCTGCG22.5316455696202533No Hit
GTAGGATGATATCGGGCGACCCCCGCGCGATACCCGTGTTCGAGAAAGAC22.5316455696202533No Hit
ATCGTCGCCCGCACCGATTCGCTGGGCGCCGGCCTCACCAAGCAGATCGC22.5316455696202533No Hit
GGTCAGCATGGAGAGATAGCGGGTTTTCATCGAGGAGGCCGCAGCCAGTG22.5316455696202533No Hit
CCTCGCGGCTGTTCCGCCTGCTGAAGATGTCGGGTATTAACTTCGTGGCG22.5316455696202533No Hit
GAGCACTTGGGCCGTAAAGCTCTGGCAATTCAGAGCCTGCGCGAGAAGCT22.5316455696202533No Hit
GCGTCGCGATTTTCACCATTTTGCCGAATCCGGCTGGGTGGAATTTCGGA11.2658227848101267No Hit
AGAACACTCCGCCGAGCAGGCCGATGACTAGCCAGGTGGTTGCGCAGATT11.2658227848101267No Hit
GATCAACTCACTCCAAACGAGATGCCCACAGACTCTCTCACGCACGAGAG11.2658227848101267No Hit
GACTTTGCACACACCCAGCGCGATGGTGCGACGTACATCCTCATCCGGCA11.2658227848101267No Hit
ATTGGCATGCTGTCATTCTTTCGCGAGCAAGTGCTGGGACCTATGCTGTG11.2658227848101267No Hit
GGGTGCGGCAATTGGTGCTGTCACCGGGGTTATTGTGGCGAAAGGTCGTG11.2658227848101267No Hit
GTCGTGTTCACCAAGGTGAATTCCGTCAGAACCGAATTACTTTGTGCGAC11.2658227848101267No Hit
ACATTAATCCATTCATGAGGATGGAGGGATTAAGTTTCCAACACATGAAA11.2658227848101267No Hit
GCAGTCTTCTGTATGAAAGAAAAGGAGCTGCACCCAACAGTGTCATAAAA11.2658227848101267No Hit
CGAAAGCGAAGCTGCTCAACGTCGAGATGTCGGTGACGTCGGCGAGCGCG11.2658227848101267No Hit
CTGATAATCTTTCACCATGGGTTCCTTTATCGTGAACAGGAATGCCAAGA11.2658227848101267No Hit
GGAGCAGACCTACAACATGGACAAGAAGACACCCCCAAGGACCTGAGTGA11.2658227848101267No Hit
GATGCGCACCGCCCCCAAGGCCGTGATCTGCGTGGTCAACGGCTGGGCCG11.2658227848101267No Hit
CTCCTGGGGGGCCCATCAAGATCAATCTCATTGCGGCGGGCTGCTCCTTC11.2658227848101267No Hit
TTCTCACACCTGGTTACTCTCCTGGGTACTCTCCCGTTTAACAGAAACCG11.2658227848101267No Hit
CCAGTCGACCGCTGCAGTGTGCCCCTGTGCAGCAATAACCTCAGGAGCAA11.2658227848101267No Hit
CGCGGCGGCCAGGCACGGTGCCAGGCCGGCGGCCCCGACGATGGCCGCCA11.2658227848101267No Hit
GGTACGAGGGGGTCGAACTGCGCCCCGGGCTGGGCAAGGACGCCAAGACC11.2658227848101267No Hit
GACCACATGACCTTGACCGTCATCGTGCTGGCGGTACTTCGTCCCGAACC11.2658227848101267No Hit
TGGCTGCCCGTAGAAGAGGATGGCCGTCTGCACGACCCGGTGCTGAGGGA11.2658227848101267No Hit
GGCCAGGGCATGGTATAAAAATGTTCCTGACAGGAGCGCCTATGACCCAT11.2658227848101267No Hit
GGATAGCTCAGTTGACGTGAAAGCCAGAGCGGGCTAATAGGCACATCCTC11.2658227848101267No Hit
TTTTTGCTTTTGCTGATTTTGTTGCTTCTGCTGATTTTGATGAGAAGCAG11.2658227848101267No Hit
GAGTGAAGGTAAGGGAACAGAGTCATTCGAGAGGGAGCCCATGATGTTCG11.2658227848101267No Hit
CACTCTCCCCCGGTCTCGTCCTTGTGCTTTCTGCGCGAGGGATCAGACGG11.2658227848101267No Hit
CAACGCGCACTTGCCATTTGTTGATAAACTTCCGGTGTTTTGAGTTGATG11.2658227848101267No Hit
GATGTGGTTCGCCAGATGGTCGGCTTCTTCGAGGTACTGGGTCGTGAGGA11.2658227848101267No Hit
GGGCAACAGCACTTTTGCCTGTCCGGGCCACCAGCCCCGTGCTGGTGGCC11.2658227848101267No Hit
CGCTCGCGGCAGATCTGCGGCGAGGCCTGGACGTAGACGGTAACCAGGCG11.2658227848101267No Hit
ACGGAACGTCGAAGGAATAAACAAACCAGGAGAAGATGGTGCATCCGGGA11.2658227848101267No Hit
CCCGTGGACAGATCGCCTTCGACCTCCGTGGTGCCAGGCTTGTACTTCAC11.2658227848101267No Hit
GTTCACGGTCTCGGCGACGTGCACATGGGCTTCGGCATTGTGACCCTGCT11.2658227848101267No Hit
GGGCTTGCGCCTCCATGCAGCCCAGCTAGGCCCCTCCGAGGTCATCCCAC11.2658227848101267No Hit
GTTTTACCACGCTTAGGCGCTGGCAGGGCTTCACCGGTGGCGAGACGCAA11.2658227848101267No Hit
ACTTGGGTGATGGCGTAGCCCGGCTCCAGTCCGAGTTTTTCGGCGACGCT11.2658227848101267No Hit
CCTGCGTCGAAACCAGCGCCCTCACCTTCTGTTTTGAGCTGGTGTGCCGC11.2658227848101267No Hit
CGACGTTATCGCCGCGTATAATCGTTGTGTTGTCCTCCTCGTCCTCGACA11.2658227848101267No Hit
GATGATGATATGCTTAACGCCCGCATCCAGCGCGTGACGGATAAGTTCAC11.2658227848101267No Hit
GCGCGATAGTGCCTTTCGCTAATGCCCCGCGCGACAAGAATTTGGGAATT11.2658227848101267No Hit
GCGGTACAGTTTGAGCTATCACAGCAGACGCTGAACCGTTATCCGGAGTG11.2658227848101267No Hit
AGACTCCATCTCAAAAAAAAAAAAAAAGTTATGGAAAAAACTTAGGAAGA11.2658227848101267No Hit
CATCTTCTCCGCCTACCTCCGCCAGCGCTCGCTTACGACTGAACCCGCTC11.2658227848101267No Hit
ATGAAGACGGCCATAGCCAGGGTGCCGAGAAGACCAGACCAGCGCGTCGC11.2658227848101267No Hit
ATCGCGGCGCGAGTGGAAGAGTCGTTATGCAGATTGCTATCCAAGAAAGT11.2658227848101267No Hit
GCAGAAACAGCGCGTCATGATCGCCATGGCCATGAGCTGCAACCCGCGGA11.2658227848101267No Hit
TCTGCGCACCCTGCTTGGCGGCATCAAAGGCCCCCACATTGACGTTGACG11.2658227848101267No Hit
CCATTATGGAAACTATAGATGAATTCTGGATGGTGAATATCGATTAAGTC11.2658227848101267No Hit
GGGCCAGGCAGCACCGATCACCCAGCGACAGCCCGGCGGTGCGGGTGGCC11.2658227848101267No Hit
CCTTTTGTACTCGGAAGTACTCTAACATTGTTCCTGCTGTTCCGAATGTA11.2658227848101267No Hit
GCGACCTCTTTACCCGTAGCACTGTCGACGATACTGACGCCCAAAGGAGG11.2658227848101267No Hit
ACGCCGTGTTTCAGCGCATGAACGACGTCGGGGGGGCCCGGGGGGGGGGG11.2658227848101267No Hit
GTCTCGCACGGCCCAGAAGATTTGACGCGCGCTGAGCGCTCCGACCGACA11.2658227848101267No Hit
TCTCTACTGTGATTTCGTAAAGCTCGCAGCCCTCGCTGTCGAGCCCGATG11.2658227848101267No Hit
CGCCGGGAGGGAGCTCGATCCGGGCGATCTCGCCGTGGTGGCGCACCCGG11.2658227848101267No Hit
CCGCGTTCATGCGCCCGGGCGACCAGCTCGTCAAAGTCATCCAGCGTGCC11.2658227848101267No Hit
CTCGGTGACCGCGACGAGCGCCATTTTTCCTTCCCTGACCAGGAAAACCT11.2658227848101267No Hit
TGCAAGTCAACCTCGTCAGCCAGCCATTCGAGATGATCGACGGATACAAC11.2658227848101267No Hit
CGTCGCCGTAGTCGTAGACGGTGAGCAGGGTCTCGTTGCGCCACGCCGCT11.2658227848101267No Hit
GTCGAGGCGGTCGTTGCGGCGCAGCTCCGTCTCGTTCATGCCGAGGCCGA11.2658227848101267No Hit
CCGAGGAGCCCTCGGCGTCTAATTCGCGGACGGTGAATCGGGCATGACGA11.2658227848101267No Hit

[OK]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)