FastQCFastQC Report
Thu 1 Sep 2022
EGAF00003672353

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00003672353
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences85
Sequences flagged as poor quality0
Sequence length100
%GC59

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[FAIL]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[FAIL]Overrepresented sequences

SequenceCountPercentagePossible Source
ACCTTACACGCCGTGAATGGCCATTCCATGACCAACGTACCTGAAGGCAT33.5294117647058822No Hit
GTCATACTGGGTTGGTTTTTGGTGTTCTACGTTGATGCCATTTGTGCAGT33.5294117647058822No Hit
GCCGAAAAACTGCAGCACGCGAAATTCGTGGTGGACGCCGAGGGTAAGGA22.3529411764705883No Hit
CTACTATGGTGTTCCGGCCTCGCACATGTCACGTGGTGATAGAGGGCGGA22.3529411764705883No Hit
CGGAGGATCTCATCGAGGTAGCTCTCCACGCAGGCGTCGAAGAGCCCTCG22.3529411764705883No Hit
CTTCTCTGAACCGTCTGCGTCGTCTGGGGATGGTCTGGTTTATGGGCCAC22.3529411764705883No Hit
CTGTTAAACCCGTATATCTGGCTGCTGTCGCTTTGCTACGTGCTGGTCTA22.3529411764705883No Hit
GTGGTGGGACGGGCTCCCCATTCACCGCGCACCGATCCGCCGCGACGAAT22.3529411764705883No Hit
TCTTCGGTCATGGCGTCATCGATGAAGTCACCGGGATCGAACTTTCCCGA22.3529411764705883No Hit
CTCGGGCACCGTCGTCTGGAGCGAGCCTCTCTCGCGCATACCGCGCGACG22.3529411764705883No Hit
GTCGAACCGCGCGCGCTTGTCCTTGTCGGTCAGCAGGTCATAGGCCTGCG22.3529411764705883No Hit
GCTGCCCGGCGGCAATGTGAATGTTTTTCTGCGGCCCGCCAGCGCAACGC22.3529411764705883No Hit
GCCGAGGCGTGATGGAGCCAGCTCGAGGAACCCGACCCCCGTCGCGATGG22.3529411764705883No Hit
GGAGAGGATGCCAATGTTGCCGTCGTTGACATCGGCGAATTCATTCTTGA22.3529411764705883No Hit
ATTCGCGCCAAAGCGTCGGGCAGGTCGTGGGTTTCGCAGTGAGCGAGCAC22.3529411764705883No Hit
CCCGTGGAAGACCTGGTGTACTTCGAGCAATGGGGGCAGCGCGACGACCA22.3529411764705883No Hit
ACGTATGAGCGAGCTGTCGGATAATTTCGGAAACTCAGGTCACTGGCAAG22.3529411764705883No Hit
GGACAACACCCTTTACCCGCCGGACATGGCGCTGTTCCCGCAGATCGAGG11.1764705882352942No Hit
AGCGACTCCTCCCCGCTGATTTCGACATGGAGCTGTACGTCGACTGTCTC11.1764705882352942No Hit
CTTAGCCGCCCTCATCGCCATGACGTCCGGGGCCGCCCTCGCCGAAAACG11.1764705882352942No Hit
TGGTGGCCCTGACGTACTCAACGCGGTGGAGTTTACCCCCGCCGCGCCTG11.1764705882352942No Hit
TCTTCGTCGAGGAGGCCGACGAGGTCCCCGAGGGTGAACTGGTGGTCTTC11.1764705882352942No Hit
GCTGGAGCACCTGCGCGAGCTGGCCGATCTGCCGAACGTCGCAGTGCAGA11.1764705882352942No Hit
GCCTGGATTACATCACCTGCGTAAACGTCCTTGAAATCACATCCTGCTGC11.1764705882352942No Hit
GTGCATACGGCGAAGTCCGTGCGCGTTCGCGATGAGCATCGCGTATTGCA11.1764705882352942No Hit
CCCTCGAAGATCGTGTAGATCCGCGCGTCGCGCGCCATCCGCTCGACCGG11.1764705882352942No Hit
GTGCTGGCCTTTCCTCAGAAGAAGGATTATTCCACTTCGCGTGCATCAAT11.1764705882352942No Hit
TCAATACGTTGCCGCTGCCCGTTGAGCGTGTACGCCTGCTGATTGGCCCG11.1764705882352942No Hit
TGCGTCAGGCTGAACATCATGAGGGTGCTGATAATCAATGTTCTCTATTG11.1764705882352942No Hit
GACCACATGACCTTGACCGTCATCGTGCTGGCGGTACTTCGTCCCGAACC11.1764705882352942No Hit
GTACGCTGTTCACCTGACCAAACGATACGCTCTGCAGACCCTGGTTCAGC11.1764705882352942No Hit
GAAGAGCGGGACGAGATCATCGCGGAACTCGCGGAACTTGCCAGGCGCGA11.1764705882352942No Hit
GACACGATCTCCGCCCCGTTGATCTCCACACTTGGACTGATGATTTTTGT11.1764705882352942No Hit
GACTTATTTGCTGCTTCAGGAAATACAGAGTTTTATGGAAAACTTACGCT11.1764705882352942No Hit
TGCCAGGTCTCGTCCCAGGTGCACAAGGTCGTCGTCCGCTCCTCCACCGC11.1764705882352942No Hit
GGACCAGGATCTGATCGATGAGTTCAATGCAGAACTCGCCGACCTCATGG11.1764705882352942No Hit
GGTAATAACCATTAGCGTTGCTAATGTCACCACCCAAAGAATAATCAAGA11.1764705882352942No Hit
TGGAGAAGGTGGCTGGGCTGATGTCGGCCGCGCGCCGCAAGCAGGTGCTG11.1764705882352942No Hit
GATTAGGTTCCTCGACCGGAGCCGGTACCCAACCGACTGCTGCGCCTGAG11.1764705882352942No Hit
CCAGTGATGTTGTAGCGACGATACTCATCACGCAGCGGACCGTTCGCATC11.1764705882352942No Hit
GTGCCAGCCACGGACGAAGGGTATATTAACCCATAGTCCGTGGCTGGCAC11.1764705882352942No Hit
ACACAGGAGTGTTTAAGCACAGCAATACCACCAGAGAGTCCATGACCATA11.1764705882352942No Hit
GGTTGCCGGCGGACGGCAGGCCAAACGACGGCAGGCTGAACGATGCTCCC11.1764705882352942No Hit
GATGCGAAGGTGCTGAAGCTGCGCCAGACCGGCACCTACCTCAACGAGCA11.1764705882352942No Hit
CCCGATGCCCGCGCCGGGGACTTCGCGCAGGCGATGATGGACCTGGGCGC11.1764705882352942No Hit
GACGCAACTGGTGCTGGAAAACGCGCCGGTTGAGGAGATCGAAACCGTCG11.1764705882352942No Hit
CTTGGGAGAAGCGCGACTTGAAGTGGTTGACGCGGATGTTGTTCTTGATC11.1764705882352942No Hit
GTCAGGCCCATTTTAGCGACCTGTTCCTTCCATTCCGAAATGGGCCTGAC11.1764705882352942No Hit
GGCCCGGTGACCTTCACTAAGCAGTCGGTTGCTGAGTTGCGCAAGGTCAA11.1764705882352942No Hit
TAAATGTTTTTCTGAAACGCTAGTTATGCTGGGTGCTAGCGATGGGGGTT11.1764705882352942No Hit
GTCGACCACCTGCACGAAGCCCGCGTTGACGCGGCGCGGAAAACGCGCAT11.1764705882352942No Hit
CTGTTGAGCACCTTATCAATCACATCCAGTACGCCTTCCTCGTTATTATG11.1764705882352942No Hit
CCGCATCGCTCTGTTTTTAACATCGCCTATGGAAAAAAATGGTCTGTTCA11.1764705882352942No Hit
CGGCTGCGTCATGGAAAGTAGCGTGGAAATATCTTCCGGTACGTGGCGGT11.1764705882352942No Hit
CCACCGCCGCGGCCTGCCTGTCCGCGGTCAATCGACCAAAACGAACGCCC11.1764705882352942No Hit
TTCTAAAAATGCTTGAGGAGTAAGAGATGGCTATTACTAAGCTGGTTCTG11.1764705882352942No Hit
CTCCCATATTCTCCGAGCGTTGCGGTCAGGTCGGTGCCCGGAAGCGCCGT11.1764705882352942No Hit
GCTGGCAGCCTGGCTAGGATTGCGTCTCGGCGTCCCGGTCGAGCGGGTGA11.1764705882352942No Hit
GTCATGGGCTGAGGCCTTGCAGACGGCCGCCGCTGGATTGACGAAAGCCG11.1764705882352942No Hit
ATAACTACCACTCACGGGCGAATAATCAATTCCACCAGATTCAAAGACAA11.1764705882352942No Hit
GGGGTCTGCAGTGCAACCTGCCGATAAACGCAGGTTGCCGCTGCGTCAGA11.1764705882352942No Hit
CAATGCACGACAGCAAATGCGCGGCGGTTCAGCCCGGAAACCCGGGATGC11.1764705882352942No Hit
CCAGTGATGTTGTAGCGACGATACTCAGCACGCAGCGGACCGTTCGCATC11.1764705882352942No Hit
GGATCGTCGGACATTCTTGCAAGGACTTGGCGCGGCCGTTGCAGTCGGAG11.1764705882352942No Hit
CCAGAGCTTGGTGCTCTGGATCGGCTTGATCTCCTCCTTTCTTGACTGAG11.1764705882352942No Hit
ATCTCGACGGGCGAAACCCACCAGGCCAAAACCTGGTGGGAGTAGGCCAC11.1764705882352942No Hit

[OK]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)