FastQCFastQC Report
Wed 31 Aug 2022
EGAF00003672449

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00003672449
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences28
Sequences flagged as poor quality0
Sequence length100
%GC61

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[FAIL]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[FAIL]Overrepresented sequences

SequenceCountPercentagePossible Source
GTGAAGACTTACGACCTGGAAGTCTGGGTGCCGAGCCAGGACAAGTACCG310.714285714285714No Hit
CCTCTGAAGTGAACCTTCCCGCCGTTTACCGACACAGGATCGGCCAGCGC27.142857142857142No Hit
TGCTCAGCGTCCTTAAACTTCCGACTACTCAATCCTGACCTCTTGCAGCC27.142857142857142No Hit
CGCCTATGAAAATCGCTATGCCTTCTTCCTGCGGTTCAGGGACGGCAAGG27.142857142857142No Hit
CCTCTAGCCTTGGACGATCGGGGGAATCGACTTGAAGATGATGAGAATTA27.142857142857142No Hit
GGGGAGGCCCGAGTACCGTCTGTTGCCTATGACGGTGAGCATAACCCATC13.571428571428571No Hit
CCTTGGGACCTTCTCCAGCCCCAGGATGTGACGAGCCGACATCGAGGTGC13.571428571428571No Hit
CACTGCCACACCTGGGAGCGGGAGATTTCCGCCGTGGCGGCATCTTCCAT13.571428571428571No Hit
GCACAGTGCCGGGGTGAGCCCGCAGGAGAAGCTGATGCGGGCCGCAGACT13.571428571428571No Hit
GTAACCGCCGACGACATCGCGTCCCCGGCCCCCATCGAAGAGGCGGTACG13.571428571428571No Hit
CGCCAGGGCGGTCCCGCAGTGAATGCGGTACACAAACGCCTGAGTGGTGC13.571428571428571No Hit
GTCAGCACCAGTTCATCGGCCAGCGGCAGCGCCTGCGCATAGAGTTCCCG13.571428571428571No Hit
TGCTGCGAGACGCAGGCGTCCGGCCGCAGGCGCGCAGGTACCGGGCGCCG13.571428571428571No Hit
CCCGCTCCGACGACGACGCACCGTCGGCGGACGCGGGCCCGGTGGCCTCC13.571428571428571No Hit
GAGCTTGCACGTCACGATGCCGAGCACGATGGCGCCCGAGACTGTCGCCT13.571428571428571No Hit
GTGGCGCGGCGAGGAAGGTGATGACGAGGAACTGGAAAATGAAGATGATG13.571428571428571No Hit
GATGGAAACCGGCGACGTCTACATCCTCGAGGCCAAGGCCACGCTGCTGG13.571428571428571No Hit
TCCGTAGGCCGTGTCCCAGGACCAATCTAGGGTGTCCACGGTGACCTGCG13.571428571428571No Hit
CAACGCCGATCCCGCCGCGGATATGGCCGAAGCCAGCTTCGACATCCTCG13.571428571428571No Hit
ATGCAAAGAACGGAGTCGTTGGTAACACGTCACACGTGCACCCTGAGAAG13.571428571428571No Hit
GTATTACCTCAGTGTGTACGATATCAACAGCCTTGAGCAACCAACTAACC13.571428571428571No Hit
ACGGCACGGTCCGTTACAACAAAGCGGTCGAGGTCCAGAATTACCACGAA13.571428571428571No Hit

[WARN]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)