FastQCFastQC Report
Wed 31 Aug 2022
EGAF00003672450

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00003672450
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences28
Sequences flagged as poor quality0
Sequence length100
%GC60

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[FAIL]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[FAIL]Overrepresented sequences

SequenceCountPercentagePossible Source
CATTGAGGGTGTGCAGCAGCTCCGGCTTGCCGGTTTCCGGATTGCGGTAG310.714285714285714No Hit
CTTCAGGGCCTTGATGCCACGAAGCTGGAAGCTTCGTCGAGGTGCTCATG27.142857142857142No Hit
GCACGGCGCTGGCCGATCCTGTGTCGGTAAACGGCGGGAAGGTTCACTTC27.142857142857142No Hit
GTGTGCGTCTGCAAGTTTGAGATTCGAACTTTTCGCTCGATTGTTCGCTT27.142857142857142No Hit
ATGCAGCGGCTGACGAAGTCGCGCGGTGCCAGGTCCTTGAGCGTCGGTGC13.571428571428571No Hit
CGATCACACCGTCCCCGTCGGAATCGAACAGCCCGCGCGGTTCGTGGTAA13.571428571428571No Hit
GATGTACACTGTATGAGAGGAGACTGAATAAGAGCGCATTCATCTGAGCT13.571428571428571No Hit
GGCCATCGACGCCCACCACGGACATCTGGTGCGGCACGGAAATACCGAGA13.571428571428571No Hit
GCCCGCGCGTGCCGCGCGAATCCAACATCTGGTAGGCGAGGTTTATCCCG13.571428571428571No Hit
TCTCCGCGCATTACGTGCCCGGCGGCACCGACGTCGCCGGCGTGGTGTAC13.571428571428571No Hit
ACAGGGGGTGGTCGCCTCCAAAAGAGTAACGGAGGCTTTCAAAGGTACCC13.571428571428571No Hit
GCCCGCGCGTGCCGCGCGAATCCAACATCTGGTAGGCGATGTTTATCCCG13.571428571428571No Hit
CCATCCCCCGGCACCACGCCGGTGAGCGATTTCAGCTCCAGGGTGGAGCC13.571428571428571No Hit
GGCTTCGACCTTGGCCAGCGCCGCGCCCTGCGGGCCGCCCTCGCGCAGCG13.571428571428571No Hit
ACGTAGCATAGATGAAACATCGTCGGCTCAATCAAGCTTGTTCTGTGGGT13.571428571428571No Hit
CTCCGGAACAGCACGGTATTCTGCCTGCTCTTCCTCTTCAACATTTGTTT13.571428571428571No Hit
GGACTCCATCGGCCGCCCGCTTCCCGGGCGACGCAACATCGTTGTGACCC13.571428571428571No Hit
AGCTAGGCTGGGAGCTGTTGGCTAATGGGCCTGAGATCCAGCATGACACG13.571428571428571No Hit
CTGAGGAAGAGACCCTCATCGAGGAGTCGTTGTCCTTCGCCTTGCCGCCT13.571428571428571No Hit
ATCGCCGCTGCCGCCGTGCGCGTTTCCACCCCCAGCTTCTCGAAGATGTG13.571428571428571No Hit
GCGTTCATGCCCACCGGCGGGGCGCACCTGTCCGAGCTCCAGGCAGCCCT13.571428571428571No Hit
CTTCCGGTCGCGGCGAGCGCCCGGTCGATCACGGTCGGCGGATCGCCGCC13.571428571428571No Hit
GAAGAACGCCATCGCCATGGCCGGCATCATCAACGACAAGAAGCGCGACG13.571428571428571No Hit

[WARN]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)