FastQCFastQC Report
Thu 1 Sep 2022
EGAF00003672716

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00003672716
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences52
Sequences flagged as poor quality0
Sequence length100
%GC60

[OK]Per base sequence quality

Per base quality graph

[FAIL]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[FAIL]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[FAIL]Overrepresented sequences

SequenceCountPercentagePossible Source
GTCGCGGCGACGAAAAGGCCGCCGACCACGCCGCGGTGGAGGCGATGCGC47.6923076923076925No Hit
GCGTCGGGATCTTCGCTCAAAGCGCTCGCTTCGCATCCGGGGTACGCGTC23.8461538461538463No Hit
GATTTTCTGCAGCATTTTGCCTGAACGCTCCGATAACGCGATCAATTCGT23.8461538461538463No Hit
GGCGACAATCGTGTCGCCGATACCGGCGAAGCGTCGAACAGAACCGCCGA23.8461538461538463No Hit
GTGCAACACCACGTTCGCGGACATCTCGACGAAGTTGGCGCCGGGGGAGC23.8461538461538463No Hit
GACCCGGACCGGCCGCCGCACCGGGATGCCGAAGTGCCGTTCGTAGGCGC23.8461538461538463No Hit
GAAGAGTACTGCCTGCCCACGATCAAGGCGAACGGCATGTACATGAAGCA23.8461538461538463No Hit
GAGAGGAGGAGGGCCCTGGTACGTGGAGGTGGAGGGGCGAGAAGGTGAAG23.8461538461538463No Hit
GCCTGCAGGATCGCGGGCATCTCCGCCGCCTTGGCCCCCGCCAGCTCGAT11.9230769230769231No Hit
TATCGACGCTGCCGATCTTCACGTCGCGGCGGACCACGGTGTCGCCCGGG11.9230769230769231No Hit
GGGGTTTCACCGTGTTGTCAATGCTGGTCTCGAACTCCTGAGCTCAGGCA11.9230769230769231No Hit
GCCCAGGTCCAGGCAGGGTTCAAATGCTCCTCATAGTGTGCCAGCAGCCT11.9230769230769231No Hit
CGATTCGAGAGCCCAGGCTGCGCAACCACCACACGAGGGCGGGCGTGCCC11.9230769230769231No Hit
CCTCCAGCCCGCGATTAGATTCCGTAACTGCCTCACGCACGTACTCAAAA11.9230769230769231No Hit
GCGCACCACAGCATTTAAAAAATCGGGAAAAACTTTGGAACGAAGTCGAA11.9230769230769231No Hit
ATCAACAACAGCGCCAGCGGGAAGGTCCCCGGACCGATTCCGGCCAGCAC11.9230769230769231No Hit
CATTAACGCGTTCATCTCCCTGGTATCCACGGTGGTGGGCGCTATCGCTG11.9230769230769231No Hit
CTTCATGGCTCCTCAATGCTTGGGGGGGCGCTTCTTTCCCGCTAGGGGCC11.9230769230769231No Hit
ATCTGAGACCACCTTAGCCTGGACCTCATTTTTGATATCACTATCAGGAT11.9230769230769231No Hit
GGTGACGATGCGGCGGGCGCCGCGGTGGCTCACACCGGGGGTGTTCACGG11.9230769230769231No Hit
CCCCCTCACTCTCTTTCTCCTACTCCCACCATGTAAGATGTGCCTGCTTC11.9230769230769231No Hit
CGTCGTTTTCGCGTGCCAGCTGCGCCAGCTCGACCAGATTTTTTGTTCTT11.9230769230769231No Hit
AGTCCGTCGGTCGCCCTCGATTTCTTGGGTGATCAGTTCGCAGTTGGCGA11.9230769230769231No Hit
GATCATTGCGAAGTCCTGTTCCTGCGGCGCGAATTCCAGGCCCATGACGC11.9230769230769231No Hit
AGATATGGCTGAACAAGCTGGGTAATTTAAAATGTGCATTTTTATTTAAA11.9230769230769231No Hit
CTTCGATATTCACCCGGGCGACACCCTGCTCCTGCTCGCTGACACGAACC11.9230769230769231No Hit
CCGCGGCTGTTAGCGGCAGCCTTTCCGCCAAACGCGAATCGATCTCGACG11.9230769230769231No Hit
GGTCTCGGGCAACCTGGGCGAGGCGCCGACGGTCGAGATCCCGGCTCCGC11.9230769230769231No Hit
GTCGAGCGCCACGACCGCGGTGGGAATTCCGGCAGTGCTCGCACCCACGA11.9230769230769231No Hit
GATGATTTCGCCATTTGGCGCGGTGCGGATGTTCAGCGGCGTGCCGGTCG11.9230769230769231No Hit
TGACGAGCTGGACCGTGCCGTGGAGAACTACCAGAAGATCCAGTAGCCCC11.9230769230769231No Hit
CCTAATGATAGCTCTGAAAGGTTGAGTATGTTGGGTGAACTAAAAAGGAT11.9230769230769231No Hit
GAATAGGAAAGTAGCAATTTATAAAACAAAAACAGACCCTTTCAACAGAC11.9230769230769231No Hit
CCCTGTGGCTTGTATTTCATTGCAAGTAGGATTCCCTTTGGTATGTGAAT11.9230769230769231No Hit
CTTGGAGAATAGGAAAAAGTCCTGGCTATTCAAAATATTAGTTAAGCCTC11.9230769230769231No Hit
ACCCCAGCACCGTCCATCTTGGCCGCCTCGTAGACCTCCTCGGGAATCAC11.9230769230769231No Hit
CACCTTCAGCCTGTAATCTTCAGCTTGTCCTATTCCCCTGTCTCTTATAC11.9230769230769231No Hit
TGTCGGGGGCGGGGGGCCCGCCCCCCCCCCACCCCCCCCCCCCCGCCCCC11.9230769230769231No Hit
CTATCGACGAAGATCCGCTCTGGCGAGAGTTAGAAAAAGAGCCTGATCAC11.9230769230769231No Hit
GTCACCGACCGCGGCGTCGTGCGCGCCGGTTCGCGCGCGGTGATCGCCAG11.9230769230769231No Hit
AATGAACATGGCGGGACGGGTAGGACGAGCATTGTTGCTGGCGGGCGTCG11.9230769230769231No Hit
GGGGTGAAGTGGACGTGGAAGTTCTTGTGTCGGGCCTGTCTCTTATACAC11.9230769230769231No Hit

[FAIL]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)