FastQCFastQC Report
Wed 11 May 2022
EGAF00003672779

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00003672779
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences3367017
Sequences flagged as poor quality0
Sequence length100
%GC49

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[OK]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[WARN]Overrepresented sequences

SequenceCountPercentagePossible Source
GTACATGGGGAATAATTGCAATCCCCGATCCCCATCACGAATGGGGTTCA44290.13154076739143283No Hit
GTACATGGGTACCTGGTTGATCCTGCCAGTAGCATATGCTTGTCTCAAAG40670.12078941092367518No Hit
GATTAAGAGGGACGGCCGGGGGCATTCGTATTGCGCCGCTAGAGGTGAAA35800.10632556948776914No Hit

[OK]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)