FastQCFastQC Report
Wed 31 Aug 2022
EGAF00003672853

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00003672853
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences21
Sequences flagged as poor quality0
Sequence length100
%GC50

[OK]Per base sequence quality

Per base quality graph

[FAIL]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[FAIL]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[FAIL]Overrepresented sequences

SequenceCountPercentagePossible Source
TAGTAGTATAGTGATGCCAGCAGCTAGGACTGGGAGAGATAGGAGAAGTA29.523809523809524No Hit
GTCCTGGGAGTGCTGGAATCTCCACACCACTTAAAATGAAAAAGGAAATC29.523809523809524No Hit
CCTTGGCGCCTGCCTGATCCTCCAAATCACCACAGGACTATTCCTAGCCA29.523809523809524No Hit
GGCCACATCTGCCTCAGCATCAGTGGCCTTCTTCTCGGCCTGCTCCAGTT29.523809523809524No Hit
ATGTCGAAACATAGGTCTGAGCAGTGATGACGACGTCGTCCCACAGTGAA14.761904761904762No Hit
GAAGGTTTCTATTCGTTGGTTGTGGACCTGGACAAAGTCCAAGTCTGTGG14.761904761904762No Hit
TCGGAACTGAGGCCATGATTAAGAGGGACGGCCGGGGGCATTCGTATTGC14.761904761904762No Hit
GGCTCCAGGGTGGGTGGTCACTGCCTCCGTAACCTTGAGGCGCAAGGCAC14.761904761904762No Hit
CCAACAAGATTGAGGAATTTCTGGAGGCAGTGCTGTGCCCTCCCAGGTAC14.761904761904762No Hit
AGACATTACTAGCCATTTTGAGCCAGACTTGACTATGTGGTTGGTTGGAT14.761904761904762No Hit
GAACTATAAAAAAAAGAAACTAATTTTCCCAAGGACATTTACATTAGGCT14.761904761904762No Hit
CAGTTAAAAAGCTCGTAGTTGGATCTTGGGAGCGGGCGGGCGGTCCGCCG14.761904761904762No Hit
CTGTTGGTTTCACTGATGAGGGGATACATCATTCAAACAGCCAGGAATTA14.761904761904762No Hit
CTTTGAGACCAGCCTGGCCAACATGACAAAACCCCCTCTCTACTAAAAAT14.761904761904762No Hit
CCCCGGGTCTGAATGACCAGGTTGTCCCGGTCACCAGGCAGGAGTTCTGT14.761904761904762No Hit
CTGGTTGCCACATTCTGTTGAAGTTTGAATCCCCTTGGAAATTCCCATGA14.761904761904762No Hit
TGTTAAGGAAGTCAGCACTTACATTAAGAAAATTGGCTACAACCCCGACA14.761904761904762No Hit

[OK]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)