FastQCFastQC Report
Wed 31 Aug 2022
EGAF00003672854

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00003672854
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences21
Sequences flagged as poor quality0
Sequence length100
%GC51

[OK]Per base sequence quality

Per base quality graph

[FAIL]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[FAIL]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[FAIL]Overrepresented sequences

SequenceCountPercentagePossible Source
GGACATAGCCTATGAAGGCTGTTGCTATAGTTGCAAGCAGGAGGATAATG29.523809523809524No Hit
GCTGAGGACCGCTGCAAGCAGCTGGAGGAGGAGCAGCAGGCCCTCCAGAA29.523809523809524No Hit
ATATTGTATATTGCCATATCGTCTGGTGAAAGGGTTAAATTACTTCACCT29.523809523809524No Hit
GCTTCTGACTCTTACCTCCCTCTCTCCTACTCCTGCTCGCATCTGCTATA29.523809523809524No Hit
GCTGTGTCTGTACCCTGGCCATGGGTAAAGACACAGCTGGTTTCCCCATT14.761904761904762No Hit
GCCACGGAGGGGAGCGCTTGGTGGCAGTCCGCGGGCCCGGACGGAAGGCT14.761904761904762No Hit
GCCGCTACCCGGTGTGCGGCAGCGACGGCACCACCTACCCGAGCGGCTGC14.761904761904762No Hit
GTACATGGGGTCAATGGTGCAACTGTCTAGGACAGTGGTTAGAATTTAAT14.761904761904762No Hit
GTCCCCCACCAAGTACAGCACCATCTAGGCTGCTACCCCAAATGGTGCCA14.761904761904762No Hit
CATCGAGGGGGCGCCGAGAGGCAAGGGGCGGGGACGGGCGGTGGCTCGCC14.761904761904762No Hit
GTCTTGCTCTGTCACCCAGGCTGGAGTGCAGTGGAGAGATCTTGGCTCAC14.761904761904762No Hit
CACACCACCTGTACTATGTGTAACTTTGGCAACAGGTTGCAGTCAGCCAG14.761904761904762No Hit
GTTTTAAACAGAAGGTGAACCTCTGAGATAGAAAATCAAGTATATTTTAA14.761904761904762No Hit
GCTCCGGAAGGTTCACTGTGGGACGACGTCGTCATCACTGCTCAGACCTA14.761904761904762No Hit
TCCCTGGGAATAGCTAAGGTGTGAGATTGTCCAGAGTCCTATGACAGACC14.761904761904762No Hit
ATTTAGGGCCATCTTCCAGCTTTTTACCAGAACGGCTATCAATCTTTTCC14.761904761904762No Hit
GGCTCCACTCCTGGTGGTGCCCTTCCGTCAATTCCTTTAAGTTTCAGCTT14.761904761904762No Hit

[OK]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)