FastQCFastQC Report
Thu 1 Sep 2022
EGAF00003672864

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00003672864
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences32
Sequences flagged as poor quality0
Sequence length100
%GC53

[OK]Per base sequence quality

Per base quality graph

[FAIL]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[FAIL]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[FAIL]Overrepresented sequences

SequenceCountPercentagePossible Source
GTTCTACACCGCCCAGATCGGAGCGGACATCGCCCTGCTGGAGCTGGAGG39.375No Hit
TTGCAGGTGTAGCCAGCCGGGCAGCAGTGCTGGCGATCCTCGCAGCACAC26.25No Hit
TGGTGTACGTTCCCCATGTCGCTGTTGGGGTAGAAGCTGAGATAGTATCA26.25No Hit
GATCTGAAGGGGAGATGCCATCACTTTGTCTTTAATTTGGGTGTCTACCT13.125No Hit
GGTTAGGACCTTCAGCCAAAATGTTGAGATCAGAGTCAGTTATCAGACAG13.125No Hit
CCCTCCTGAATATCTATACTTAGCGGCGGATTACCCGGCCCTCTTCATTG13.125No Hit
GAACTAGCTCAACACTCTTGCTAACAATTTAGTGTCTATACAGGAAGGCT13.125No Hit
GAGGAGGCCATCCGGGACAACTCACAGGTGAACGCAGTCACGGTGCTCAC13.125No Hit
GGAGCGTGTGGAGGAGAAAGAGGGAATCCCCCCACAACAGCAGAGGCTCA13.125No Hit
GAAAACAGGATGTGGGCAACAAAACAACACAGGAAGGAAACAGCAAGAGG13.125No Hit
GTCTAATGCTGTGCACTCCCATGACCCCCAAAGTGTTTCATGTAAATAGA13.125No Hit
GGCAATGCCTGCTGGGAGCTCTACTGCCTGGAACACGGCATCCAGCCCGA13.125No Hit
ACTCCCTATCTGGGAAGCTGGACCGGACGTTTGCGGTGACTGATGAGCTT13.125No Hit
GTGGGAGGCGCTCATCATTGTCCACATTGCCCCAGCCAGTGACCCAGCAC13.125No Hit
AGCTTGTTCTCGTTGAGCCTTTCTAACTTCAGGTTTCTGATTCCTCTTGG13.125No Hit
ATCCGGCAGAGGTACTCGGCCTTTGCCATCATTGCATCGCGAATTTCGCT13.125No Hit
GGCATATGCCACCGCACCCAGCACCTCTAAGCTTCTTTATATGTATTACT13.125No Hit
GGCGTAGAGGGCCAGGCTGACGGAGATGTTGTAGATGATGGTCACGTAGA13.125No Hit
TCTAAGGGCATCACAGACCTGTTATTGCTCAATCTCGGGTGGCTGAACGC13.125No Hit
CCCACAGTTCTACACCGCCCAGATCGGAGCGGACATCGCCCTGCTGGAGC13.125No Hit
CACCTGCTCAGTATGACGCTTCTGAGCTAAAAGCTTCCATGAAGGGGCTG13.125No Hit
GTGCAGAGACGCGGGACATTAACCAGCAGCACGCGGGGGTGAAGTAACTC13.125No Hit
ATATTAGACAGTGCCTCCACCAGTGGCTGGAAGCCCTCGTTCACCTGGGT13.125No Hit
GTCTGAATGCTCCACTTTTTCAATTCTCTCTCCATTCTTCAGTAAGTCAA13.125No Hit
GTCTGGTGCCAGCAGCCGCGGTAATTCCAGCTCCAATAGCGTATATTAAA13.125No Hit
ATCAGTTTCTCATCTGTAAGATGACCAGAGTTGCTTAGATGATCTCCTAG13.125No Hit
GAAGAAATAAAACTAAGACCTGAGTACCTTACCATATGCTAAGCATATTC13.125No Hit
CCTCTTGGAACCCTTGACTCCTAATCTGCAAAATGGGAGGACTTGAATTC13.125No Hit

[OK]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)