FastQCFastQC Report
Wed 31 Aug 2022
EGAF00003673383

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00003673383
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences14
Sequences flagged as poor quality0
Sequence length100
%GC50

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[FAIL]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[FAIL]Overrepresented sequences

SequenceCountPercentagePossible Source
CTGCTGCAGAAACTCTTCATCATCTTGGTCCTCATTCATTATGGCAAACT214.285714285714285No Hit
CAATTGAAGTGAAGATGATTGACCGCACGCAATTGATATTAGATATTTTT214.285714285714285No Hit
ATTCCTGAAGCTGACAGCATTCGGGCCGAGATGTCTCGCTCCGTGGCCTT17.142857142857142No Hit
TCTCCTCTCTCCCCTTTTTCCCCTCCCCCTTCTCTGTCTCTTGCTTGGTG17.142857142857142No Hit
GGGAGTCTTTCCACTGGATTCACAATGACATCCTTTCAAGAAGTCCCATT17.142857142857142No Hit
GTGTTTGACCGCGTCGCTCCCATGTCGCCTTTCAGGAGAAATAGTACAGG17.142857142857142No Hit
GGTGAAACCAAAAGGCACTGAGCATGCGTGGTGGGGCAGGGAAGGACACC17.142857142857142No Hit
AGGCATGGTTGTGCATGCCTATAGTCCTAGCTACTCAGAAGGCTGAGATG17.142857142857142No Hit
GCCATGAGGGGTGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGCG17.142857142857142No Hit
CCATAAAAGTGTAACCCATGGCATTTGAAAGCAAACACTCTTTGTAATTA17.142857142857142No Hit
ACGCAGAGTACATGGGCTTGGCTTATAGAAGCATCAGCCCCAATCTCTGC17.142857142857142No Hit
GAACTCTGTCTTGGAGAGAGTGTAGTTATAACCATCCTTTTCCAGCATAC17.142857142857142No Hit

[OK]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)