FastQCFastQC Report
Wed 31 Aug 2022
EGAF00003673426

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00003673426
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences32
Sequences flagged as poor quality0
Sequence length100
%GC57

[OK]Per base sequence quality

Per base quality graph

[WARN]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[FAIL]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[WARN]Sequence Duplication Levels

Duplication level graph

[FAIL]Overrepresented sequences

SequenceCountPercentagePossible Source
GGTACCACGTGCCTTCCCCTGCAGTGGTGCGGTACGGACTTATCGATAAC618.75No Hit
CGGTAACCGTCGTTTGCGTACCGTCGGCGAGCTGATCCAGAACCAGTTGC39.375No Hit
GTATACATCCGTAAGAGATCAGCAGCAAAGAGGGCAGATTCTTCTCCACC39.375No Hit
ATGCGGTCCACGACCGTCGTGGCCTTGGGGATCTCTTCGGCCGCAGCCGT26.25No Hit
GTTCCCAGGAGGTCACCCGCTCATCGTCCAGCCCGGGAACCCACATGTCC26.25No Hit
GTTCTAAAGCAAATAATTGTTCGCAATATTCACTGATAAAACTCATCGCT26.25No Hit
CTGCTAACTTCGGCGGCGGTGGCTTATGCCGGAGTTATCACATTTGTGGG13.125No Hit
GGATGTATCGTCCTTGTGGCCACTGGTCTTCACACGAATGTGGCTGAGGA13.125No Hit
GTCATGACTGGGCCGCCTCTCGGTAGATCTCGCCCAGGCTCGGGCGAATG13.125No Hit
CGTCATCATCGCGATCGAGCCGAAAGAGCCCGGGTTCGGCTATGAGTTTG13.125No Hit
GCCATGCACGAGCACAAGGCCCATCGTCCACGTCGCGAGGGAGAACGAGA13.125No Hit
GTTATCGCCCGGTCGGTGCATCAGGGGAGCACGGTGACCGGCAGCAAGGC13.125No Hit
GTGTTACCAATCTGCAAGGCTGCCGCAACGAGCAGAAGCACAGACATCCC13.125No Hit
TGTTGGCCCAGATGTGGAACTTTGGAGTGCCCAAGCGTTATTTGGGTGCC13.125No Hit
GAGGAGACTCCACCTCCTCGACGAACAGTGAGCCGAGTCCATGCCTCAGC13.125No Hit
AATGAGGGGAGCCGACTGGGCCGTCGTCGCAGTAAGAGCCTGCCAGGATC13.125No Hit
TACTCAACGTGAGAAGTATTGATCGTGATACCACGAGCTTTTTCTTCTGG13.125No Hit
TTGTCGAGCCCATCTTGCAAGGAGCCGGAGGCATGTGGCCGTGGTCTCCG13.125No Hit
GTTGATGATTACCTCTCTCAAAGCGCGATAAATCAGCAACGGATGTGCCA13.125No Hit
GGTATCGGCGGAGCGCTTCGCCTGTGCCTCAATGGCTTTGAAGTTCTGGC13.125No Hit

[OK]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)