FastQCFastQC Report
Thu 1 Sep 2022
EGAF00003673471

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00003673471
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences74
Sequences flagged as poor quality0
Sequence length100
%GC48

[OK]Per base sequence quality

Per base quality graph

[FAIL]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[FAIL]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[FAIL]Overrepresented sequences

SequenceCountPercentagePossible Source
CATAAACGATGCCGACCGGCGATGCGGCGGCGTTATTCCCATGACCCGCC45.405405405405405No Hit
GTGTACCGCTTATCTCAGGGGAGCTGGGAGAGGATTTTACATATTATTTC34.054054054054054No Hit
ACTCCAGCCTGAGCAAAAGAGTAAGATCCTGTCTCTAAGAAAAAAAGACG22.7027027027027026No Hit
GAATAGGGCGATCAGTCGCTGGGTGTAGACCCGAAACCAAGTGATCTATC22.7027027027027026No Hit
ACCTTGGCCTTCTCGGACAAGGCCGCAATGGCTTCCGGGCGCCCATTTGA22.7027027027027026No Hit
ATCTTTTTGGGACTATGCATTGATATGTACCATGAGATAGATCGATCAAT22.7027027027027026No Hit
AATATAGCAAATGTTAATTATTTTTAGTATCAGACATTATGTTTGTTGTA22.7027027027027026No Hit
ATTGTAAGAGGTCTTTATTATGAATAAAAGTGTTTGTCAATTATGTTTTG22.7027027027027026No Hit
ATCATCGTCCACACGACGCTGGCCGTGCTCACGCGCCTCGCGCGCGAGAT22.7027027027027026No Hit
CCGCGGTTCTATTTTGTTGGTTTTCGGAACTGAGGCCATGATTAAGAGGG22.7027027027027026No Hit
CAACCATACTCCCCCCGGAACCCAAAGACTTTGGTTTCCCGGAAGCTGCC11.3513513513513513No Hit
GGCTGTTCTACTTGCACTTTAAGGGGGACAATCTTAGTTACCTTTTTTTG11.3513513513513513No Hit
GTGTTAAGAATGGTTTTCTTCCCAGTAGCTACAGGTAAGGAATAGGGGCT11.3513513513513513No Hit
CCCTCGATGCTCTTAGCTGAGTGTCCCGCGGGGCCCGAAGCGTTTACTTT11.3513513513513513No Hit
TTACAGGGCCTCGAAAGAGTCCTGTATTGTTATTTTTCGTCACTACCTCC11.3513513513513513No Hit
ACACAGGAAGCAGCAAATGCAATGGCCAGAGCCTGCCTGTCACAGTCACG11.3513513513513513No Hit
CTTCAGAGTCTCTTAATTTTTCAAAGCAGGGAGGAAACTAAATCTGGTAA11.3513513513513513No Hit
GTTTAACATAGTGTTAGGTGGCAGATAGGCTGGGAAGAGCTAGTATTGTA11.3513513513513513No Hit
ATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTCGTA11.3513513513513513No Hit
GTGGGTGGTGGGGGGGGGGGGGGGGGGGTGGGTGGGGGGGGGTTGTTTGG11.3513513513513513No Hit
GTATCAACGCAGAGTACTTTTTTTTTTTTTTTTTAGGAGCAGCGGCCCAT11.3513513513513513No Hit
ATCCAACTTTCGCCCCTCGCCTCTAGCCACGACTGCCTCTATAAACACCT11.3513513513513513No Hit
CCTTTAAGTTTCAGCTTTGCAACCATACTCCCCCCGGAACCCAAAGACTT11.3513513513513513No Hit
CCTTAGATGTCCGGGGCTGCACGCGCGCTACACTGACTGGCTCAGCGTGT11.3513513513513513No Hit
AGCACATACACCAAATGTCTGAACCTTCGGTTCCTCTCGTACTGAGCAGG11.3513513513513513No Hit
ACTCTGATGCATTCTTCAGTATGTCAATTAAATTTTTTAGCTCCAAAATT11.3513513513513513No Hit
ATCCGAGGCCAACCGAGGCTCCGCGGCGCTGCCGTATCGTTCCGCCTGGG11.3513513513513513No Hit
CTACCATGGTGACCACGGGTGACGGGGAATCAGGGTTCGATTCCGGAGAG11.3513513513513513No Hit
TTCCAATTACAGGGCCTCGAAAGAGTCCTGTATTGTTATTTTTCGTCACT11.3513513513513513No Hit
ATTAATGAAATAAAGTGAGAAGAGAAGTTTAGAGAAAAAAAGAGTAAGAA11.3513513513513513No Hit
ATGCAACGGCAGACAAATTGTGTAGATTTGTTAACCAATAGCTGATGGCA11.3513513513513513No Hit
CTTCCTATCATTGTGAAGCAGAATTCACCAAGCGTTGGATTGTTCACCCA11.3513513513513513No Hit
CACCAGACTTGCCCTCCAATGGAACCTCGTTAAAGGATTTAAAGTGGACT11.3513513513513513No Hit
CATTAATCAAGAACGAAAGTCGGAGGTTCGAAGACGATCAGATACCGTCG11.3513513513513513No Hit
CCTCACCGGGTCAGTGCCAGGTGGGGAGTTTGACTGGGGCGGTACACCTG11.3513513513513513No Hit
CTGTAATAAAACTTTACTTTTGTAAGGTTGGGATGACTAATCTGTAAAAG11.3513513513513513No Hit
ACTAGTTACGCGACCCCCGAGCGGTCGGCGTCCCCCAACTTCTTAGAGGG11.3513513513513513No Hit
ATGCGGCGGTTGTTCTGTGATCTACTAGCGCCAATCTATATTACTCACAA11.3513513513513513No Hit
GGTGTATGTTGTTTTGCTTAAAGTTGTAGTTTCCAAGAGCCTACTGGAGG11.3513513513513513No Hit
GTATGGACATTTTAATAACATTAATTCTTCCAATCCATCAAGATGGGATA11.3513513513513513No Hit
CTGAAAGAAATCATAGACTTTGGAAGGCCGAGGCGGGCGGATCACGAGGT11.3513513513513513No Hit
GTCTCGTTCGTTATCGGAATTAACCAGACAAATCGCTCCACCAACTAAGA11.3513513513513513No Hit
GCTCTCAAAGGATCAAAACTAGCTTCATTATTCATTTTCTTGTTTTTATA11.3513513513513513No Hit
GTCCTATTCCATTATTCCTAGCTGCGGTATCCAGGCGGCTCGGGCCTGCT11.3513513513513513No Hit
GAATATGCCCCCATGGCCGAGGCCAAGGGGCTGAAGCTGGCCTTTGCGCC11.3513513513513513No Hit
ATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTGGT11.3513513513513513No Hit
GCTCAGGGAGGACAGAAACCTCCCGTGGAGCAGAAGGGCAAAAGCTCGCT11.3513513513513513No Hit
CGTAAGCCGAGATCACGCCACTGCACTCCAGCCTGGCCAACAGTGAGACT11.3513513513513513No Hit
GTAATAAAAAAGCATCTCAGCTGAGCGTATGCTTTTGTTTGTCCGACACC11.3513513513513513No Hit
GGATGTGGTAGCCGTTTCTCAGGCTCCCTCTCCGGAATCGAACCCTGATT11.3513513513513513No Hit
AAATTATACACCATTACCAAGTAGAGTTTATTCCAGAGACAGGTGGCTAA11.3513513513513513No Hit
GGTAGGCACACGCTGAGCCAGTCAGTGTAGCGCGCGTGCAGCCCCGGACA11.3513513513513513No Hit
GCGTTATTCCCATGACCCGCCGGGCAGCTTCCGGGAAACCAAAGTCTTTG11.3513513513513513No Hit
CTCTGTAACTAGGACCACAGGTGCATGCCACCACACCAGGCTAATTTTTA11.3513513513513513No Hit
GTTCTTTGGAATAGTTTCAAAAGGAATGGTACCAGCTCCTCTTTGTATCG11.3513513513513513No Hit
CCTGGTGTGGTGGCTCATGCTTGTAATCCCAACACTTTGGGAGGCCAAGG11.3513513513513513No Hit
ATATGGAATGGTACCGAATGGAATGGAATGTAATGGAACGGAATGGAATG11.3513513513513513No Hit
GTCTGGTTGGCGAGTTCCTTGACCTCCGCCGCGACGACGGCGAAGCCCCG11.3513513513513513No Hit
CGCCCCCCCGCCTCACCGGGGACAGTGCCAGGTGGGGAGTTTGACTGGGG11.3513513513513513No Hit
TTTTTAGGATATTGTGAGTAATATAGATTGGCGCTAGTAGATCACAGAAC11.3513513513513513No Hit
GGCAACAACACATCATCAGTAGGGTAAAACTAACCTGTCTCACGACGGTC11.3513513513513513No Hit

[OK]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)