FastQCFastQC Report
Thu 1 Sep 2022
EGAF00003673472

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00003673472
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences74
Sequences flagged as poor quality0
Sequence length100
%GC52

[OK]Per base sequence quality

Per base quality graph

[FAIL]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[FAIL]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[FAIL]Overrepresented sequences

SequenceCountPercentagePossible Source
CTCCACCAACTAAGAACGGCCATGCACCACCACCCACGGAATCGAGAAAG34.054054054054054No Hit
GTTCAAGTTCAGCTTTTGTAAACGTATATTTCTCGTTACAGAAGTGGCAT34.054054054054054No Hit
CTTTCAATGTCCATTTTCATCAATCAGCAACTTCCCAGCACTCGCCGACT22.7027027027027026No Hit
GGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGG22.7027027027027026No Hit
GCCCGGCGGGTCATGGGAATAACGCCGCCGCATCGCCGGTCGGCATCGTT22.7027027027027026No Hit
GTTCTATGGATCAGGTTATGGACATCTTTGGGTCAGTCATTACTCCATCA22.7027027027027026No Hit
GCTCACACCTGTAATTCCAGCACCTTGGGTGGCTAGGAGGTCAAGGCTGA22.7027027027027026No Hit
ACAGAACGCTCTCCTACCACTTGCAATAAATTGCAAATCCGCAGCTTCGG22.7027027027027026No Hit
CTGCAAGCGCTCCCACTGCGCGCTATCGCCGTGCTGCAGCGCATGGCGCA22.7027027027027026No Hit
CCTTTCTGCAGCCCTTCTTCATCATCTAATATTTTTAAATACATTCTCGA11.3513513513513513No Hit
GTCTTTCTCTGTCGCCCAGGCTGGAGTGCAGTGGTGTGATCTCGGCTCAC11.3513513513513513No Hit
CTCCACCAACTAAGAACGGCCATGCACCACCACCCACGGAATCGAGAGAG11.3513513513513513No Hit
ATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT11.3513513513513513No Hit
GGACAGGCGGGGGACCGGCTATCCGAGGCCAACCGAGGCTCCGCGGCGCT11.3513513513513513No Hit
GTCAGAAAAGTTACCACAGGGATAACTGGCTTGTGGCGGCCAAGCGTTCA11.3513513513513513No Hit
GAATAGGTGTTAAATTTTGTAAAATGCTTTTCTGCTGACTGATACCAACA11.3513513513513513No Hit
ATATTGTTATGCGTGAATTTGATCCTGTCATTATGATGTTAGCTGGTTAT11.3513513513513513No Hit
GAATAAAAAGTGAACCTAAGAAGAAAAGCCGGAGCACACAGAAGTGCCTA11.3513513513513513No Hit
AACATGCACAGCGGTCAAACAGTATGTCCCAAGGGGACTTAAGCGCGGTG11.3513513513513513No Hit
CCCATCAGCACTGCAAAGATGGAGTAACAGAGACTGGGTTTGCCTCCCAC11.3513513513513513No Hit
CAGTGGTATCAACGCAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAATAA11.3513513513513513No Hit
TAGCAGAGTGGCGCAGCGGAAGCGTGCTGGGCCCATAACCCAGAGGTCGA11.3513513513513513No Hit
GCGATACAAAGAGGAGCTGGTACCATTCCTTTTGAAACTATTCCAAAGAA11.3513513513513513No Hit
TTGTCTCCTCATGTCTTTCAGAAGAAGAGCCAAAGGGCTTGCTGGGCCCA11.3513513513513513No Hit
GCGTAGGGTAGGCACACGCTGAGCCAGTCAGTGTAGCGCGCGTGCAGCCC11.3513513513513513No Hit
ACCATGGAACACCCCCCTTCTTGGGTATTAATGGGGGATCGCAGCCCGGA11.3513513513513513No Hit
GCCTGAGAAACGGCTACCACATCCAAGGAAGGCAGCAGGCGCGCAAATTA11.3513513513513513No Hit
AGATCGTGCCACTGCGCTCCAGCCTGGGCGACAGAGTGAGACTCCGTCTC11.3513513513513513No Hit
GGAACCATCTATTGTTTTGTTTGCCAGAAAGTGCACCCTGTATGGTCTCC11.3513513513513513No Hit
CACTCCAGCCTGGGTGACAGAGCGAGACTCCGCCTCAAAAAAATAAAAAA11.3513513513513513No Hit
ATTCAAGATAACACAGAGAAGGAATTTAGAATCCTATTAGATAAACTTAA11.3513513513513513No Hit
CTTTGACTCGGCGAACCCGACTCAGCGCTGGATCAATCAGTGCATAGAGG11.3513513513513513No Hit
TTCCATTTGATTCCATTCCACTCGGTTTCATTCCATTTGAGTCCACTCCA11.3513513513513513No Hit
GCCGGGCGCGCCCCCCTCGCGGCCGATGCGCTGGAATTCGTCGAAGATGC11.3513513513513513No Hit
GTGGTAGGCTGAGGCAGGCGGATCACTTGAGGTCGAGTTCGAGACCGTCC11.3513513513513513No Hit
TTCCCGTGTTGTGTCAAATTAAGCCGCAGGCTCCACTCCTGGTGGTGCCC11.3513513513513513No Hit
AACTAAGAACGGCCATGCACCACCACCCACGGAATCGAGAAAGAGCTATC11.3513513513513513No Hit
GTTTCTACAATTCATTCAATGCCTGGTTCAACCCAGGAAGAGCTCAGTTA11.3513513513513513No Hit
GTTTTACGTTCTTTTCCCTCTTATGATTGTTGCTACAACAGGATTTTTCT11.3513513513513513No Hit
CTCCGGCCCCGGCCGGGGGGCGGGCGCCGGCGGCTTTGGTGACTCTAGAT11.3513513513513513No Hit
CTCCCCGGGTCGGGAGTGGGTAATTTGCGCGCCTGCTGCCTTCCTTGGAT11.3513513513513513No Hit
GTCTGTATTCGTACTGAAAATCAAGATCAAGCGAGCTTTTGCCCTTCTGC11.3513513513513513No Hit
CAGTGGTATCAACGCAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAATAAC11.3513513513513513No Hit
GGTCCGTCTTGCGCCGGTCCAAGAATTTCACCTCTAGCGGCGCAAGACGG11.3513513513513513No Hit
GCCCCGCTTTCACGGTCTGTAATCGTACTGAAAATCAAGATCAAGCGAGC11.3513513513513513No Hit
CCTATAGACTCAAGCAAAGAACCAGTAGAACTAATGAACAAATTCAAAGA11.3513513513513513No Hit
GTCTTGCGCCGGTCCAAGAATTTCACCTCTAGCGGCGCAATACGAATGCC11.3513513513513513No Hit
ATGCTATACTCCCCCAGTCTTACATGGTTAACTGGAGGGTGTGGGTTGGT11.3513513513513513No Hit
AAATTCTTGGACCGGCGCAAGACGGACCAGAGCGAAAGCATTTGCCAAGA11.3513513513513513No Hit
CACCAGGAGTGGAGCCTGCGGCTTAATTTGACTCAACACGGGAAACCTCA11.3513513513513513No Hit
GGTATCAACGCAGAGTACATGGGCGGTGTGTACAAAGGGCAGGGACTTAA11.3513513513513513No Hit
TGATTTTCAGTACGAATACAGACCGTGAAAGCGGGGCCTCACGATCCTTC11.3513513513513513No Hit
GTTAAAAAGCTCGTAGTTGGATCTTGGGAGCGGGCGGGCGGTCCGCCGCG11.3513513513513513No Hit
GACGGAAGGGCACCACCAGGAGTGGAGCCTGCGGCTTAATTTGACCCAAC11.3513513513513513No Hit
GAGTATGGTTGCAAAGCTGAAACTTAAAGGAATTGACGGAAGGGCACCAC11.3513513513513513No Hit
AATCTGCTCACTGCAACCTCCGCCTCCTGGGTTCAAGCAATTCTCCTGCC11.3513513513513513No Hit
CTCCCCAAGTCTGGGGCAATGGATTGAGAGCTAGTAGGCTCCAGTACACA11.3513513513513513No Hit
GATCAAAACCAACCCGGTCAGCCCCTCTCCGGCCCCGGCCGGGGGGCGGG11.3513513513513513No Hit
GTGCAGGAGATCGGCCGGCAGGTCAGCGGATCGACGAGCCTCGCCCAGGC11.3513513513513513No Hit
GCTTGGCTGAGGAGCCAATGGGGCGAAGCTACCATCTGTGGGATTATGAC11.3513513513513513No Hit
CCCATCAGCACTGCAAAGAAGGAGTAACAGAGACTGGGTTTGCCTCCCAC11.3513513513513513No Hit
ATATCTAACACGAGGATGTTCCTGTTGATACCGTCTGCGATAGGCTAGTT11.3513513513513513No Hit
TAGGAAGAGCCGACATCGAAGGATCAAAAAGCGACGTCGCTATGAACGCT11.3513513513513513No Hit

[OK]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)