FastQCFastQC Report
Fri 10 May 2024
EGAF00003673731

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00003673731
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences7
Total Bases980 bp
Sequences flagged as poor quality0
Sequence length140
%GC51

[OK]Per base sequence quality

Per base quality graph

[FAIL]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[FAIL]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[FAIL]Overrepresented sequences

SequenceCountPercentagePossible Source
CATCAGTCCCACCTGCACCAATAAGGAGCTTCGAGCCAAGTTTGAGGAGT114.285714285714285No Hit
AGCTAATACATGCCGACGGGCGCTGACCCCCTTCGCGGGGGGATGCGTGC114.285714285714285No Hit
GACTTAGCGTTGCCGCGTCCGAGTCCGGCCATCAGTGGCTGCAGATCCGG114.285714285714285No Hit
ATTTTATAGTGATTTCTTAAGGCCTATATCCAATGAAACCATTTTAAAAG114.285714285714285No Hit
TCATAGAACTGGGCACCAATCCGCTGAAGAGCTCAGGAATTGAAAATGGG114.285714285714285No Hit
GGTATTTGCTGTAAAGAGGGGCGTTGAGTCCGTCCGACTTCACTGCCCCC114.285714285714285No Hit
GATCTTAATTGTCGGATTTGCAAGGCGCCTCAGCATGATATCATAAGGCT114.285714285714285No Hit

[OK]Adapter Content

Adapter graph

Produced by FastQC (version 0.12.1)