FastQCFastQC Report
Thu 1 Sep 2022
EGAF00003673770

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00003673770
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences146
Sequences flagged as poor quality0
Sequence length140
%GC51

[OK]Per base sequence quality

Per base quality graph

[FAIL]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[FAIL]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[FAIL]Overrepresented sequences

SequenceCountPercentagePossible Source
CATCTAGCCCGCTGTCCAGGGCACCTTTTTTTTTCTCCCTATATTTCGGT42.73972602739726No Hit
CGGCGCTGCCGTATCGTTCCGCCTGGGCGGGATTCTGACTTAGAGGCGTT32.054794520547945No Hit
CTTCAGAGAAGGGCCCCAAATAAAAATACCCGACTTTTACCAGCTAGAAT32.054794520547945No Hit
TCTGAAGACATTCCCGTTTCCCAAGAAATCCTCAAAGCTATCCAAATATC21.36986301369863No Hit
GTGTGAGGTGTCAGTCTGCCCCTACTGGGAGGTGCCTCCCAGTTAGGCTG21.36986301369863No Hit
CCCTGATGGTCAGGACCTGCCCCCTTACCTCCCCGCAACTGGGGGCCTGG21.36986301369863No Hit
GACTTATACCAGTTCGCTTACTTGGTCAGCCGCTTTAAAGCCCAGCACAT21.36986301369863No Hit
CTATCAATCTGTCAATCCTGTCCGTGTCCGGGCCGGGTGAGGTTTCCCGT21.36986301369863No Hit
TCCATGACATGGGAGGCAAGCTATGGGGCTGCAAGCTCACCGTGGAAATG21.36986301369863No Hit
CCTCCCGTGGAGCAGAAGGGCAAAAGCTCGCTTGATCTTGATTTTCAGTA21.36986301369863No Hit
TCACGAACAAGTTTCTGAGAATGCTTCTGTCTAGTTTTTATGGGAAGATA21.36986301369863No Hit
CAATTACAAGGTAAAGTCCCATGATAGGCCGTCTGCAAGCTGGGGAGAGA21.36986301369863No Hit
GAGAAACCCTGGCCAGCCTTTGGACTGCTCCCATGTTGGATAGTTCTGTG21.36986301369863No Hit
GTATAGGAAAATCACAAAGATATTGCAGCAATTTGGGACTAGTAGCAGTG21.36986301369863No Hit
CCGCGGGGCCGAGCCAGGGGCCCTAGGCGAGCCAGGCGCCGCCGCCCCCG21.36986301369863No Hit
CCTACTCTGCTCTGTGCTCAATTTCTTAGATACAAAGAAAGTGATATGTG21.36986301369863No Hit
ATCCTACCACTCCCAATTAATCTTTCCATTTTCGTCTGCGTTTAGTAAAT21.36986301369863No Hit
AGTGGAGCCTGCGGCTTAATTTGACTCAACACGGGAAACCTCACCCGGCC21.36986301369863No Hit
AGACAGATCAGAGTGGGCCATTTCTGTCTTTACTACCCCACCGCTATCTC21.36986301369863No Hit
GGGCAAGATGAAGTGAAAGGTAAAGAATCGTGTGAGGGTGGGACTGTCTA10.684931506849315No Hit
ATACCGGGGAGCTGAAGTGGATGGACATGGTGGCTGGGCCGGGATGGACC10.684931506849315No Hit
CGGTACACCTGTCAAACGGTAACGCAGTTGTCCTCAGGCGAGCTCAGGGA10.684931506849315No Hit
CATCTACAAAATGCCAGTATCAGGCGGCGGCTTCGAAGCCAAATTGATGT10.684931506849315No Hit
CATCAAACCTGTGCCTCGATAGGGAGCACTGTTAACACTTTAATAGCTAT10.684931506849315No Hit
GGGTTTCACCGTGTTAGCCAGGATGGGCTTGATCTGCTGACCTCATGATC10.684931506849315No Hit
TTCTTGGACCGGCGCAAGACGGACCAGAGCGAAAGCATTTGCCAAGAATG10.684931506849315No Hit
CCCCCCGTGGCGGCGACGACCCATTCGAACGTCTGCCCTATCAACTTTCG10.684931506849315No Hit
ACAACAAACCCTTTACTCCTTGAATTAAGCCGTTCATCAGAAATGTATGT10.684931506849315No Hit
GAATAATGGAATAGGACCGCGGTTCTATTTTGTTGGTTTTCGGAACTGAG10.684931506849315No Hit
CACCAAATGTCTGAACCTGCGGTTCCTCTCGTACTGAGCAGGATTACCAT10.684931506849315No Hit
TACTAGTTAAGAGCAAAGATTTTAGAAGTAAACTGCCTGGGCCAGGTGCG10.684931506849315No Hit
AAACTTAGTTGCAAGTTCTGGATCTACACTAACCTTTAAAGAATTTGTCC10.684931506849315No Hit
GAAGAATCAATTAAATGCAGAATTAAATCCGCTTCTTTTACTTCCTCAAG10.684931506849315No Hit
TTCGATGGTAGTCGCCGTGCCTACCATGGTGACCACGGGTGACGGGGAAT10.684931506849315No Hit
GACACGGACAGGATTGACAGATTGATAGCTCTTTCTCGATTCCGTGGGTG10.684931506849315No Hit
GCCGTAGACCACCTCCGGCGCGCGGGAGATGTCGCAGCCCATGGCGATCA10.684931506849315No Hit
TTTCCGGGCGATATGATTCTGGCTGGAAACTGAGAAAAAAGCTCAGTTAT10.684931506849315No Hit
CAGCACAGAGCTGCACGTACACCCACTCCAGGCCTTGGAGAGGTGTAAGG10.684931506849315No Hit
GTACATGGGAAGCAGTGGTATCAACGCAGAGTACATGGGAAGCAGTGGTA10.684931506849315Clontech SMARTer II A Oligonucleotide (100% over 25bp)
GAGTTTGCTAATATCGAATTCACGATTATTAATGTGCTGATAGCGGTCGG10.684931506849315No Hit
CTTCTTTGAGATGTGGATCTTCTGGCGGCCAGGAAACTTGAACTTGGCCC10.684931506849315No Hit
TCACGATCCTTCTGACCTTTTGGGTTTTAAGCAGGAGGTGTCAGAAAAGT10.684931506849315No Hit
AAAGACGACCTAAATAAAAGGAAAGACATCTGTGGTTCATGGATAAGAAA10.684931506849315No Hit
TTTTGATCCTTCGATGTCGGCTCTTCCTATCATTGTGAAGCAGAATTCAC10.684931506849315No Hit
ACCCCATCGAGCACGGCATCGTCACCAACTGGGACGACATGGAGAAAATC10.684931506849315No Hit
CGTTATATTTGATTGGGTTCAAATTTGGCTGATGTCCAAATGCAGCAGAG10.684931506849315No Hit
GGGGCATAGCCGGCGCTTATTTGGCCTGGATGGTTCAGATAATCACCTGA10.684931506849315No Hit
TTACAGGCGTGAGCCACTGCGCCCGGCCTGGAAGAACTATTTTTTAAATG10.684931506849315No Hit
GCTAGGAATAATGGAATAGGACCGCGGTTCTATTTTGTTGGTTTTCGGAA10.684931506849315No Hit
TCTAAGGGCATCACAGACCTGTTATTGCTCAATCTCGGGTGGCTGAACGC10.684931506849315No Hit
CCTCGAAAGAGTCCTGTATTGTTATTTTTCGTCACTACCTCCCCGGGTCG10.684931506849315No Hit
CCCGTCACCCGTGGTCACCATGGTAGGCACGGCGACTACCATCGAAAGTT10.684931506849315No Hit
CTCAACTTCTCCCCCAAAATATAGCTCTGCTGGGCAGTTGCTGATATGCC10.684931506849315No Hit
ACCCCATCTCAAAGAAGAAAAGTTACCAGATGTCATGGGTAAAGGTTGGT10.684931506849315No Hit
CTCCGGAATCGAACCCTGATTCCCCGTCACCCGTGGTCACCATGGTAGGC10.684931506849315No Hit
CCTCGGAACTGTGTTCAATATCATGATTTGTGGGTCCTCTAAAAGGTTTT10.684931506849315No Hit
GGTGTTGGGTCAAATTAAGCCGCAGGCTCCACTCCTGGTGGTGCCCTTCC10.684931506849315No Hit
CTCGTTCTATCACCAGGCTGGAGTACAACGGTGCGACCTCGGCTCACTGC10.684931506849315No Hit
GGCCTGACCCAGCCCTGGGGACCCATGTTTCTAGTTGGGCTCCGTTGGCC10.684931506849315No Hit
GCAGAAGGGCAAAAGCTCGCTTGATCTTGATTTTCAGTACGAATACAGAC10.684931506849315No Hit
CATTGGTCCGTTCCAGAACACTGACTTGGCACCCTTGATCGCGTTGGCGT10.684931506849315No Hit
GGTGAATTCTGCTTCACAATGATAGGAAGAGCCGACATCGAAGGATCAAA10.684931506849315No Hit
ATTCTACGCAGGCTGAGAAATACCAGACTTCACTTGCAGAAGCTCGGGTA10.684931506849315No Hit
GAGGTAAGTGGAGTCTGCTGAAAGAAATTTGGCTAATACACTGCAGCACT10.684931506849315No Hit
TTAATATACGCTATTGGAGCTGGAATTACCGCGGCTGCTGGCACCAGACT10.684931506849315No Hit
TAGCGACGTCGCTTTTTGATCCTTCGATGTCGGCTCTTCCTATCATTGTG10.684931506849315No Hit
CTATCAACTTTCGATGGTAGTCGCCGTGCCTACCATGGTGACCACGGGTG10.684931506849315No Hit
TAATATTACAGAATCAGGTACGATTCCTTTCGAAGCAGTGTTTTTAATTC10.684931506849315No Hit
TCACAATGATAGGAAGAGCCGACATCGAAGGATCAAAAAGCGACGTCGCT10.684931506849315No Hit
GTCAAGCAGCATGGGGCCCGTAGCAATGCCGAGGAAGTAGCTGGTTGACA10.684931506849315No Hit
GTACACCTGTCAAACGGTAACGCAGGTGTCCTAAGGCGAGCTCAGGGAGG10.684931506849315No Hit
AATTTATATTCAGATTCTTATTTTCAGTAGGGAAGTAAGAAGTTGCAGCT10.684931506849315No Hit
GTACCGCACCAACTTGGCCAAGGGGCAGACCGGCCTGTCGGTGGCCTTCG10.684931506849315No Hit
GGGTTATGTGCACCCTCCTCCTACCCTCAATTCATTTGTGTCATAGAGGG10.684931506849315No Hit
CTTCAAAGGATGGATTGTAGGAAGCTCCGGCAGGCGCCACCTCCACGGCG10.684931506849315No Hit
GTCTTTTTCCATATCTTTTTCCCTCTAAATTTCAGAGCACTGATAGTTAA10.684931506849315No Hit
GCTGGGTATTGCTTGACTTTTATTTCCAAAAGGTAACTTAGCAGAAACCT10.684931506849315No Hit
GACCAAGGTGGTGACCTTGGAATTAGGAAGAAAGACACGAGAGGCTTCTG10.684931506849315No Hit
TCCCGAGTTTTGCCAAGCCCCCCGAAACAGGGGGTACACAAAGATACAGG10.684931506849315No Hit
TGCGTACGTAGCCGAGTGCGGTGGGGCCGTCCATCTTTTGGCAGCCGGGC10.684931506849315No Hit
GTATTCGTACTGAAAATCAAGATCAAGCGAGCTTTTGCCCTTCTGCTCCA10.684931506849315No Hit
TCGTGAGACAGGTTAGTTTTACCCTACTGATGATGTGTTGTTGCCATGGT10.684931506849315No Hit
TCTCCTACTTGGATAACTGTGGTAATTCTAGAGCTAATACATGCCGACGG10.684931506849315No Hit
GCTGTCCATGATGAATTTGGACGGCGACGCCGATATTAGTGAATTATCGG10.684931506849315No Hit
TTTTTGCGTTGATACCACTGCTTCCCATGTACTCTGCGTTGATACCCTGT10.684931506849315Clontech Universal Primer Mix Long (95% over 21bp)
CCAGAGTCTCGTTCGTTATCGGAATTAACCAGACAAATCGCTCCACCAAC10.684931506849315No Hit
TCAACGCAGAGTACATGGGAGACGACCTGCTTCTGGGTCGGGGTTTCGTA10.684931506849315No Hit
AGCCGCAGGAGGTGCCGCGCGGCTCGGAGCCCTGGAAGCAGCAGCTCACC10.684931506849315No Hit
TGAGTCCTTGTTTCGCCTTCGCTGAAGAGGTGGGCGTCGAGGTCTGGGGC10.684931506849315No Hit
GGCTATAAGTTCACGAAATGGGATCACGCCCTGAAAGGAAAGATCAAGAG10.684931506849315No Hit
GTACGTCCTGGGGTACAAGCAGACTCTGAAGATGATCAGACAAGGCAAAG10.684931506849315No Hit
CCATGGTAGGCACGGCGACTACCATCGAAAGTTGATAGGGCAGACGTTCG10.684931506849315No Hit
TTGTTGCGCCAGCGAACAGGTGTGTGACTGCGAGTCTGGGCGCGGTGCAG10.684931506849315No Hit
ATGCAAAACTATTCTCTTAAAGTTCCAGAGATCAGAAGTACAAACCCAGT10.684931506849315No Hit
GGGCTTTACCATGTTGGCCAGGCTGGCGTTGAACTCCTGACCTCAAGTGA10.684931506849315No Hit
ACCCGGGAGGCTGCGGATGCAGTGAGCCGAGATCACACCACTGCACTCTA10.684931506849315No Hit
CCCGTGTATCTCCTGCTGCTGCTGTTGCCACCACTATCTCTGCCACTGCA10.684931506849315No Hit
GTTAAACATAAAGTGACCATCAATTATTGGGGCAATAAGTCCTATGATAT10.684931506849315No Hit
GACTCTTTTTTTTTTTTTTTTTTTTTTTTTTTTTAGACAGTGACACTCTG10.684931506849315No Hit
GGTATCAACGCAGAGTACATGGGACGCCGCGTGTTCTCGCTCACGCGCGC10.684931506849315No Hit
TCCTCCCACCTCAGCCTCCTGAGTAGCTATGACTACAGCGGCTGTGTGCA10.684931506849315No Hit
ATCATGCGCTGGCCGCCGCCGACGCCGCCGATGCCGCGCGCGCCGCTGGC10.684931506849315No Hit
GTACTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTGGTTTATAACCGTTA10.684931506849315No Hit
CTCCCCTGTGTCTAAGTCCCGAATCAAACCCAATGTCTCCTTTGCTGGCT10.684931506849315No Hit
CTCAGGCTCCCTCTCCGGAATCGAACCCTGATTCCCCGTCACCCGTGGTC10.684931506849315No Hit
GCCTACCATGGTGACCACGGGTGACGGGGAATCAGGGTTCGATTCCGGAG10.684931506849315No Hit
AAATTCTTGGACCGGCGCAAGACGGACCAGAGCGAAAGCATTTGCCAAGA10.684931506849315No Hit
TAACAATACAGGACTCTTTCGAGGCCCTGTAATTGGAATGAGTCCACTTT10.684931506849315No Hit
ACACCGAGGGCCGCGTTGACGGAGCCTGGACGGCAGACAACGGTTTCTAT10.684931506849315No Hit
GACCGGGTTGGTTTTGATCTGATAAATGCACGCATCCCCCCCGCGAAGGG10.684931506849315No Hit
GTCTTCGAACCTCCGACTTTCGTTCTTGATTAATGAAAACATTCTTGGCA10.684931506849315No Hit
GAATTCGGCTGTGAATCCATCTGGTCCTGGACTCTTTTTGGTTGGTAAGC10.684931506849315No Hit
GCTCCCTCGCTGCGATCTATTGAAAGTCAAACCCTCGCTGCGATCTATTG10.684931506849315No Hit
GAGGCTGTTTCCAGAGAAGATTGGCATGTGAGTTGGTGGACTGAGTGGGG10.684931506849315No Hit
CTTTTCTGACACCTCCTGCTTAAAACCCAAAAGGTCAGAAGGATCGTGAG10.684931506849315No Hit
GTCCAGGCCACAGAAGGCACACCAGTCATTCACCACCATCCCAGCAGCAA10.684931506849315No Hit
GGAGAAGGGGTGCTGAAGAGAAATCAGCCGCAGTGAAGAGGCCCAAACAA10.684931506849315No Hit
GAACCATCCAGGCCAAATAAGCGCCGGCTATGCCCCTGTATTGGATTGCC10.684931506849315No Hit
ACACCGGGGTTAGAGTTCCTCTAGGTATGCGTCTCTGCAGGTGCCAGGTT10.684931506849315No Hit
TCACTGAATGGAATCAAATGAAATCACCGAATTGAATCAAATGGAATGAT10.684931506849315No Hit
GAGTATGGTTGCAAAGCTGAAACTTAAAGGAATTGACGGAAGGGCACCAC10.684931506849315No Hit
ATGCTATAATGTAGACTGAAAAAAGGAAGCCCCGTTGAAAACAGGACTTC10.684931506849315No Hit
ACCTCAGGTCGTGGAGAATCTACAACCTCACGCATCAGTCCAGGCTCAAC10.684931506849315No Hit

[WARN]Adapter Content

Adapter graph