FastQCFastQC Report
Tue 10 May 2022
EGAF00003673798

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00003673798
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences12423
Sequences flagged as poor quality0
Sequence length140
%GC52

[OK]Per base sequence quality

Per base quality graph

[FAIL]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[WARN]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[WARN]Sequence Duplication Levels

Duplication level graph

[WARN]Overrepresented sequences

SequenceCountPercentagePossible Source
GTATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT300.24148756339048538No Hit
CTCTAGATAACCTCGGGCCGATCGCACGCCCCCCGTGGCGGCGACGACCC270.21733880705143688No Hit
GTATAAAATCAGGCAGTTTTTGATCACGTTTATTGTAAGCCGTCAGCATC200.16099170892699027No Hit
GGTCGGGAGTGGGTAATTTGCGCGCCTGCTGCCTTCCTTGGATGTGGTAG190.15294212348064073No Hit
GTACATGGGAACAGCAATTGAAGTGAAGATGATTGACCGCACGCAATTGA180.14489253803429122No Hit
CGTTTATTGTAAGCCGTCAGCATCGGGATATCATCTGCTTCAAGCTCCTC180.14489253803429122No Hit
GCATTTATCAGATCAAAACCAACCCGGTCAGCCCCTCTCCGGCCCCGGCC170.1368429525879417No Hit
ATCCTACTGTATCTGAAAGAAGAACACTGTAGCCGCTTGGCAGGACCATT170.1368429525879417No Hit
ATCAAGCACGGTCCGCTGAAGAACCTGGACATGCCCGGCATGACCATGGT170.1368429525879417No Hit
GCCCCTCTCCGGCCCCGGCCGGGGGGCGGGCGCCGGCGGCTTTGGTGACT160.1287933671415922No Hit
CAATTGATATTAGATATTTTTGCAAAGCGGGCGAGAACGAGAGAAGGCAA160.1287933671415922No Hit
CCATGGTAGGCACGGCGACTACCATCGAAAGTTGATAGGGCAGACGTTCG150.12074378169524269No Hit
TTCTAGAGCTAATACATGCCGACGGGCGCTGACCCCCTTCGCGGGGGGGA140.1126941962488932No Hit
TATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT140.1126941962488932No Hit
GTGCTGACCAACGCCCTCATCCTCGACCACTGGGGCATCGTGAAGGCCGA130.10464461080254366No Hit
GTACGTGGACATCCGCACGAAGAAGGTGTTCGCCTACGACTATCCGGTGA130.10464461080254366No Hit

[OK]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)