FastQCFastQC Report
Wed 31 Aug 2022
EGAF00003673818

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00003673818
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences14
Sequences flagged as poor quality0
Sequence length140
%GC59

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[FAIL]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[FAIL]Overrepresented sequences

SequenceCountPercentagePossible Source
GTCACAGAGAGAGAAAAAGAGAAAGAGAGGCAGAGGGAGAAGCAGGCTCC214.285714285714285No Hit
CTACTGGATGATTGCCAACATTCCGGTGAGTCTGCGTGTGGGTATTACCA17.142857142857142No Hit
GTTCCAAGGTGGGAATGATGCCATGGTGCGCCGTCACTTTGCCGTCGTTC17.142857142857142No Hit
GCGGAACATGGGCATCATCCTGGCAAGAAAATCAGCCCTTGCTCTACAGG17.142857142857142No Hit
TGCGGACGGTAAGCATCCGTATCGCTGGGGCAGTCGTCGTGTTTGGGCGA17.142857142857142No Hit
TTGTGCAAGCGGCATTTAACCGTGAGGATAGCAAACGACCTTACGTGGTG17.142857142857142No Hit
GCTCACCGCTTACTACACCGGCCGCCCCGACGCTGCCGTAGCGGCCCAGC17.142857142857142No Hit
ATGTCAATGGTCATGAAGAAAATGGACGCGGCTGTCCGTGAAGGCGGCGA17.142857142857142No Hit
ACTGGAGACCATCGCCGCGCTGGTGCGCCAATGCTTCGACAGCGCCGACT17.142857142857142No Hit
CAGCACGCGTGGTAAACGCCATTCGGTGACCACCATCGTCATACTGCGCT17.142857142857142No Hit
ACTCCGCACCCTTCAGCTCAATACCCTGCCAACGCAGAGCCACCACTGCG17.142857142857142No Hit
CTTCAACGCAGTTTCTTGCTTCCGTAGCTCGTCGAGCATCACCCCGGCTT17.142857142857142No Hit
GTCGGTGACTGCGGCCGAGCAGGGTTCGCGCGCGGTGGCTGTCTCTTATA17.142857142857142No Hit

[FAIL]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)