FastQCFastQC Report
Wed 31 Aug 2022
EGAF00003673819

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00003673819
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences23
Sequences flagged as poor quality0
Sequence length140
%GC62

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[FAIL]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[FAIL]Overrepresented sequences

SequenceCountPercentagePossible Source
CCACCGTGGTGACCGGTGTCCGCGCCGACCACGCGCTGATGCAGGAGGAA313.043478260869565No Hit
GCTGTTGCCCAGGTCGCCGGTGAAAAAACCCAGCACCCAGTGGGCGTAGC28.695652173913043No Hit
CGCTAGGAGCGCCGTTTACCACCAACGCACTTGGGCTCCTGTCTCTTATA28.695652173913043No Hit
AACCAGTAGCATTCCCATGGCCGAAGATCCCAAAGACTCCGCGAATGAAG14.3478260869565215No Hit
AACCAGTAGCATTCCCATGGCCGAAGATCCCAAAGACTCCGCGTATGAAG14.3478260869565215No Hit
CGCTTGGGCAGCTTCAGGGCGTCCCTGTCCTCGGCGTTGCGACGAAGCAG14.3478260869565215No Hit
GCATGTTATTTATGGAGGGTTATCATGACTGAAAAGACTAAAAAGCAAAT14.3478260869565215No Hit
CTCCTGCCCCTTGGCCATCAGAGCTCTCGCTCCACCACCGCCGCCGTCGC14.3478260869565215No Hit
ACCCTGCTGCAAGGCCACGCACGCCTGACCGGCGCCAATGAAGTGGAGGT14.3478260869565215No Hit
GGCCGGCGCTGCACTGTTGCCGGACGCGCAGGCGCTGGTTGCCGGAGCAG14.3478260869565215No Hit
CTCCTGGTCCTCGCGCTGCGCTGCGAGAAGGGTGAAGTACAGCGAGGCGC14.3478260869565215No Hit
CGGATGTGGTCGTTGACCTCGTTCGCCGGACGCAGCCCGTCGAAGCGTCG14.3478260869565215No Hit
CGATCAGGACGGCCACATGATGTCGCTGGCCAGCCTGCACGGGAAGGTCG14.3478260869565215No Hit
AGGGAAGGTAGAAGAGCTGAAGGCACTCGTGGAAGAGCTTGAAGCTGATC14.3478260869565215No Hit
CGAGGAGACATTCCTGGCCCACCCTTTCGGTGAGCTGCTGGCGACCATGC14.3478260869565215No Hit
GAAAAAGGACCGTGGCCACGAAAAAACAGACCAAGGCTGCCAAGCAGAAC14.3478260869565215No Hit
CGAGGAGACATTCCTGGCCCACCCTATCGGTGAGCTGCTGGCGACCATGC14.3478260869565215No Hit
ATGTGTGCTAGCCCGTCGAGACTGAAAAGCTATAACCCGCAGACCCGAGC14.3478260869565215No Hit
CGTGGGCATTGAGCGCGGACGGACAAAAGTCACGGGGTACGAATGCTTGA14.3478260869565215No Hit

[FAIL]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)