FastQCFastQC Report
Wed 31 Aug 2022
EGAF00003673820

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00003673820
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences23
Sequences flagged as poor quality0
Sequence length140
%GC63

[OK]Per base sequence quality

Per base quality graph

[FAIL]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[FAIL]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[FAIL]Overrepresented sequences

SequenceCountPercentagePossible Source
GTACGGCGGGTAGGCCACCTTCAGGGTGTCCACCTGGTCGGTCTTCGCCA313.043478260869565No Hit
CGTCAAACTTGGCAGGACCAAGATATCGACCCGCGCCTGCCGCTAGCGGT28.695652173913043No Hit
GGTCTTGGAGGCGGGGTCGCGCAGGGCGGCGAAGGCGGCCAGGAACATGG28.695652173913043No Hit
GAGCCCAAGTGCGTTGGTGGTAAACGGCGCTCCTAGCGCTGTCTCTTATA28.695652173913043No Hit
CTCGGGGCCCGCACCCCTCGCCTGCCTTGCCTTCATGAGTGTTTTCCTCG28.695652173913043No Hit
CACTTCGATCTCACCGACCATCCGGGCCTGGATGCGCTGGAGGGCTTCGA14.3478260869565215No Hit
GCATATGTTTGCAGCATACTTTAGGTGGGCCTTGGCTTCCTTCCGCAGTC14.3478260869565215No Hit
GCGGTGTAGCGCTGGCCCTCCACCTCCACTTCATTGGCGCCGGTCAGGCG14.3478260869565215No Hit
CTCGGCGCGAAGGCAGCGGCGCAGCTGCTCGGCGCCCTGGCGCCCCTGCG14.3478260869565215No Hit
TGTCAGCACTCGTCAGGCGGTTGAACCATGTTGATTTCCCTGCGTTTGTA14.3478260869565215No Hit
GAGTTCGACCCCCCCAAGCACGAGGGCATCTGCGACCAGGACGGCTCGCG14.3478260869565215No Hit
CCTCCAGCGACAGTGACTTCAGATCGGCGTTCTGGACCCAGCAGATCGCG14.3478260869565215No Hit
CTCTCGGTTCAGCCCGATTCACAAGCACGAGATTTTGCTGAGCGCGAACT14.3478260869565215No Hit
GTGCGGGTCCATGAACTCCAGCACGACGACCTTCCCGTGCAGGCTGGCCA14.3478260869565215No Hit
CTCGCACTGCGGGCGGTGCGCCACCACGGCGGCCTGCCGGTGGGAGCCTC14.3478260869565215No Hit
CTCAAATTCTCTCCAATACGATTCAGGAAAAGTAGGCATTTGCTTTTTAG14.3478260869565215No Hit
GCATGTGCGAGATCGTCTTCTTGCTGGCCGCGGACTTCTGTGCCTTCTTG14.3478260869565215No Hit

[FAIL]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)