FastQCFastQC Report
Thu 1 Sep 2022
EGAF00003674006

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00003674006
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences83
Sequences flagged as poor quality0
Sequence length140
%GC44

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[FAIL]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[FAIL]Overrepresented sequences

SequenceCountPercentagePossible Source
GTACAAGAAATGAAATTATATATACCGATTACCAGCATAACCGTAATCCA44.819277108433735No Hit
CTTCTGGCGCGACCCGCTCCGGGGACAGTGCCAGGTGGGGAGTTTGACTG33.614457831325301No Hit
ATTGAGATAATCATGTGGTTTTTGTCTTTGGCTCTGTTTATATGCTGGAT22.4096385542168677No Hit
CCACATGAGCGAGTAAAACCCAACCAGCACTGGTGATGGCCATGCTCATT22.4096385542168677No Hit
GCTCCAGCTGCATGCGGATGCCGCGGGTCTCTCGGCGGAACATGAATTCC22.4096385542168677No Hit
GAAACCTCCCGTGGAGCAGAAGGGCAAAAGCTCGCTTGATCTTGATTTTC22.4096385542168677No Hit
CCCGAGGACACCACCTCGAACATCTTCGTCTCGCCGGCCGGCGGCAGGAA22.4096385542168677No Hit
TTAATAAACCAAGCTTTTACTAAATAGAAAGAAGGCGTAAATATGAAATA22.4096385542168677No Hit
AATCTGTGTCATAAAGTACCCCCACCTATCGGAACCTGTTTCTTGTCCAT22.4096385542168677No Hit
CTGTTATGTTGCCCAGGCTGGTCTCAAACTTCTGGACTTACGCGATCCTC22.4096385542168677No Hit
GTCTTTATAGTAGCATGATTCATGATCCTTTGGGTATATACTCAGTAATG22.4096385542168677No Hit
GGGTTCCCACTGGTTCTACATTACAGTGAGTTGTATAGTTACTTCATTAT22.4096385542168677No Hit
CACTTCGGCGGTGATTCTTTTTTCTTTCAGCGGTATTAAATTGGTAAACA11.2048192771084338No Hit
TGACTGAATTAGAAAAAATTTTACAGCAAAAAGCTATAAAACCCACCGCT11.2048192771084338No Hit
GTACTCAATATATGGTTGCTTCCATTACCATGATTATTATTCTTATTGTC11.2048192771084338No Hit
CCCATCTTTGGCTTCTGTGGGCCACGTTAGAAGACGAATAGTCTTGGCAC11.2048192771084338No Hit
GTACATGGGGCAGTGGTATCAACGCAAAAAAAAAAAAAAAAAAAAAAAAA11.2048192771084338No Hit
GTCTCTGGGTGTGCCTATGGGGAAATTCTGCCCTGGTTCTGGGGCTCAGT11.2048192771084338No Hit
GTACTGTTTGCATTAATAAATTAAAGCTCCATAGGGTCTTCTCGTCTTGC11.2048192771084338No Hit
CTGCACTGCTTTAGCTATTTCTGACGTATTTTGGTATGTTGTATCTTCGT11.2048192771084338No Hit
ATAAAACAAGAACACACTCTCCAGCCTTCTAGTTTCTGAATACGGCATGG11.2048192771084338No Hit
GCCTAATTCTACCAGAAGTACAAGGAGGAACTGGTACCATTCCTTCTGAA11.2048192771084338No Hit
TATCTACTATATACATTATATCATATAATTAAGAGGCTGCCTTTTAATTG11.2048192771084338No Hit
GCTAGCACATGTTTGTATTCAGAAAAAGTTGAAAATAAATAAATGTAAAT11.2048192771084338No Hit
TTAGAAGACGACGAGAGGGTAAAACTGATTATTATGCTCGGAAACGCTTG11.2048192771084338No Hit
GTGTATCAACGCAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAATAATC11.2048192771084338No Hit
TAATAATAAATAAATAAATAATAAAAATAACATAAAGTGTAGTAGAATTA11.2048192771084338No Hit
GGATCTCCTTCATCCCTCTCCAGAAGAGGAGAAGAGGAAACACAAGAAGA11.2048192771084338No Hit
CATCATCAGTAGGGTAAAACTAACCTGTCTCACGACGGTCTAAACCCAGC11.2048192771084338No Hit
CCAGTACCTGTCTCATGAACTCTTTGGTGGTCAAGACAAGTTCGTGGTAG11.2048192771084338No Hit
GGAAAGAATGTGGATAGAGTATCCTGTGTTGGAACGGCAGAAACGGAGTG11.2048192771084338No Hit
GAGTTGATCGCGACCTCCATACGGCCGGACAGCGCCCGTGGAATTCCGTC11.2048192771084338No Hit
CTAGGTTGCAAAAAATGAACAGAAAGTATGATATCGTTTGGATCAATTAA11.2048192771084338No Hit
CTTTTACACTGTTTGTTGGACTGTAAACTAGTTCAACCATTGTGGAAGTC11.2048192771084338No Hit
CTCCTGGTGGTGCCCTTCCGTCAATTCCTTTAAGTTTCAGCTTTGCAACC11.2048192771084338No Hit
GATGAAATCCCATTTCTACTAAAAATACAAAAATTAGTTGGGTGTGGTGG11.2048192771084338No Hit
AGGTTTAATTGACTCACAATTCGGCACGGCTGGGAGGCCTCAGGAAACTT11.2048192771084338No Hit
GAACAGACACTTCTCAAAAGAAGACATTTATGCAGCCAAAAGACACATGA11.2048192771084338No Hit
ATATGTTAAACATCTCAGGCAGAAGAGCATGCAAATAAACGTAGCACACA11.2048192771084338No Hit
GGCTAGGACTTCTAGTACTATGTTGAAGAGGAGTGGTCAGAGTGGGCATC11.2048192771084338No Hit
CTAGGTTGCTAAATTTGAAGAGAAAGTATGATTTGGTTTGGTTCAATTAA11.2048192771084338No Hit
TTCCCTATTAGTGGGTGAACAATCCAACGCTTGGTGAATTCTGCTTCACA11.2048192771084338No Hit
GACCCTACACTAGCATCATGTCTTCAGCTACTCACTCTGTCTCTTATACA11.2048192771084338No Hit
ATTGGCTATTGGTTCCTTTTAGGGGAAAATGAACATCTCTTAATTTTAGA11.2048192771084338No Hit
ATTCGAGACCATTCGATGATTGCATTCAATTCATTCGATGACGATTCCGT11.2048192771084338No Hit
AGATTGTGCCATTGCACTCCAGCCTGGGCGACAGAGCGAGACTCCGTCTC11.2048192771084338No Hit
AGCCTGTACCGCGCATATGCCGAGGCCGGCTTCGATCCGAAGACGATGCC11.2048192771084338No Hit
CCGCGAAGGGGGTCAGCGCCCGTCGGCATGTATTAGCTCTAGAATTACCA11.2048192771084338No Hit
TAATAAAAGCTTATGGGATTCAAGGGATATTATCATCTCAGTAATTGATT11.2048192771084338No Hit
GAATCAAATGGTATCAACACCAAACGGAAAAAAACGGAATTATCGAATGG11.2048192771084338No Hit
ATTCGATGATGATTCCATTCGAGTCCATTCGATGATTTCATTCGAGTACA11.2048192771084338No Hit
ATTCAACTCCCTTCATTGATTCCATCCGATTCCATTTGATGATGATTCCA11.2048192771084338No Hit
ATTTTTCGGTGATGAAATAGATGGAATTAGAGAATTTGATGCAGAGACAC11.2048192771084338No Hit
GGATTTCCAAATTGTAGCCTTTAGATGCCAATTCTACCAAAGACACAACA11.2048192771084338No Hit
ATCTGGGTCACATCCTCTTCCTGCTTTTGCTCCCAGTGGCTGCAGCTCAG11.2048192771084338No Hit
GGATGTGAGTGAGGATGTGGATGTGATTGTCAGTGTGGATGTGGTTGGGG11.2048192771084338No Hit
CTTAAGGTAGCCAAATGCCTCGTCATCTAATTAGTGACGCGCATGAATGG11.2048192771084338No Hit
GCAGGCTGTGCCCGGGAGGGGGCCAAGAGCATGGGTGGCAGCTGAAAAGG11.2048192771084338No Hit
TCGAATCGCAGTCGCTGGCGGGCGTGGCCATCATCAAGGTGTTTTTCCAG11.2048192771084338No Hit
CTACCAAACTTCAATATTTTAAAAATAAAAATCAGCCTCATGTATTTAGT11.2048192771084338No Hit
GGCAGCTTCAAAGGAAATCTCATGACTCTCTTGTAATATTTTTGGGCCAT11.2048192771084338No Hit
AATAGTAAATGAATATATCATCCATTACCAATAAATACATTTGCTGAAAA11.2048192771084338No Hit
AGTGATTAGTGATGTTGAGCATTTTTTCATATGCTTGTTGGCCATGTGTA11.2048192771084338No Hit
GCCTGGGCCTGCCCGCGAGCGAGGTCGCGCCGATGTCCGAGGGCGGGCGC11.2048192771084338No Hit
GATATAGATAGATAGTGAATGGTAAGAAATCAATGGACCAAACAACGATC11.2048192771084338No Hit
ACGCTAGACAGAAGAATTCTCAGTAACTTCTTAGTGTTGTGTGTATTCAA11.2048192771084338No Hit
GTTTGAGATCTGAGAACGGACAGACTGCCTCCTCCAGTGGGTCCCTGACT11.2048192771084338No Hit
GTCTCTATATAACAACTTGTTAAAAAATATTCATGGTTGGGCATGGTGGC11.2048192771084338No Hit

[WARN]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)