FastQCFastQC Report
Thu 1 Sep 2022
EGAF00003674012

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00003674012
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences138
Sequences flagged as poor quality0
Sequence length140
%GC48

[OK]Per base sequence quality

Per base quality graph

[FAIL]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[FAIL]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[FAIL]Overrepresented sequences

SequenceCountPercentagePossible Source
CAAGAAGACCATGCGTGCCTGCGACCACCAGGCCCTGCAGCCGGGCTTCT53.6231884057971016No Hit
AAAGGAGTTAACACATTGCAATTCACTCTACAAAGCCAAAATTACACTGA32.1739130434782608No Hit
TTCTGCAGCTGCACCTGCGCCAGGAAGGTCTCGCAACCCAGCGCGTTGGC32.1739130434782608No Hit
ACCCTATCCACATGGCATCTTTCTTTCCCAGAATCCATTCTAGAATACCC32.1739130434782608No Hit
CACCTATTTCACGCAGGCCGTTTGTGACACTTGAATCGTGCTCTTCAAAG32.1739130434782608No Hit
GTCCTTTATTAGATTTTATAGCTTTCATTGTAGAGTTCTTTCACTTTTGG32.1739130434782608No Hit
ATACAGTAAGATGCAAAAGGAAAAGTGACTTAAAGGCAAAATTTCTAATT21.4492753623188406No Hit
GTTGGTGCAGGTCGAAAGTCGCAGCGTGGTGGCTTTTACCGGATTTCGAT21.4492753623188406No Hit
GAATAAATAATTCTTATTTTTAATTTTATTTATCTGTTTTTTTTTTTTTT21.4492753623188406No Hit
CTGCAGCACTATTCACAATAGCAAAGACTTGGAACCAAGCCAAATGTCCA21.4492753623188406No Hit
GATCATGCCACTGCATTACAGCCTGGATGACAGCGTGAGGATTTGTTTTA21.4492753623188406No Hit
GTCCAGGCATAAGAAGATTACTGTTGCCAAGGATATTGGCTATAGAGGTG21.4492753623188406No Hit
GGAATACAACACTATGAAGAGGTGAAAAGCAAAATAAATATGACTTTAAC21.4492753623188406No Hit
GGTCTGGAGCATCTTCCTTCTGTTTTCTCGGGCCCCCAAGGGCACATCCC21.4492753623188406No Hit
CCAGTAGATCGAGCCCATGACGAAGGCGACGGTCAGCCCGCCGAAGCCCA21.4492753623188406No Hit
GCCGACAACAATGCTTCAGGCTCGGGAAAGACGGGCTTGGAGGCCTCGGC21.4492753623188406No Hit
ACCTTGGGTAAGTCACTCAACCTCCTTGTGCCTTGCAGGGCACATGTTTC21.4492753623188406No Hit
GCTCTACGCGGACCTCGAATGCCCGTTCTGCCGGTCCTATCTCCCAGTAA21.4492753623188406No Hit
CTTCATGGGGGGCTATAGCCAAGATAGCTACTAATTACGGGCCACTACCA21.4492753623188406No Hit
GTTTATTTCTCAGTGGTGTCTTCTCTAGCCAGCGTATTTAACACAGAATC21.4492753623188406No Hit
CAGGCGCAGAAGGTGGCCTATGCCCAACTCGCTGCGGTGGGATGCGCTCA21.4492753623188406No Hit
GCGTTGACATGACGTTCACTGTGCCCCTTTGCAGGGTTTACCCGGAACGA10.7246376811594203No Hit
CCCATTCATCATGGCCACCTCGTCGCAGCCTCGGAGGTTGCGGCCAGATT10.7246376811594203No Hit
CTTTGGTCATTTTTTTCTCCGCCTATCCTTGGGATGCAATTCCATGTGAC10.7246376811594203No Hit
ATCTTGGGTATGGATGAGTTAGCAGAAGAAGATAAATTGGTGGTTTACCG10.7246376811594203No Hit
GTGAATCACATTTATTGATCTGAGTATGTTGAACCAACCTTGTATTCCAG10.7246376811594203No Hit
GTAGAGACATACGACCTGGATCGATCTAAGGGGGAAAATACTCTCACAAC10.7246376811594203No Hit
CTCCTTATCACTTTGAAGTGCAATTGATTGATTTAGGCCACATCATTTAT10.7246376811594203No Hit
GCTATACCAACAGTTTGGAGCCTTCATTTTAGTTAAAATTATGTAATGCT10.7246376811594203No Hit
GTGTTTCAACTCTGCTCTCTCTAAAGAAAGGTTCACCTCTGTGAGTTGAA10.7246376811594203No Hit
ATCATAAGTAACAATTTTTGATTTGTGTGACTTAGTTCAAAAAAATTACA10.7246376811594203No Hit
GGGATAACTGGCTTGTGGCGGCCAAGCGTTCATAGCGACGTCGCTTTTTG10.7246376811594203No Hit
GAACAGCCCGAACATCTCGGTGGCCCCGGTGATCGGCTGTTCGACGCGCA10.7246376811594203No Hit
CTCCTTATCACTTTGAAGTGCAATTGATTGATTTAGGCCACATCATATAT10.7246376811594203No Hit
GTCTAGGGTTGGGAGCTATTCGTCAGCGCCGTGGCTGGAGCCGCCGAATC10.7246376811594203No Hit
GTCTAGTTGTGGAAACTGTGGTGTGGAAATCAGTGACCAAGAACCAGACT10.7246376811594203No Hit
GGTAACGGGTAGCTGAAGGGACACATTGGTCGCCTTGACCTGAGCTACAG10.7246376811594203No Hit
ATGTGTGAGTGTTCTTAACTTATGGAAATACAGTTATTTACATAAGTGCA10.7246376811594203No Hit
GGGCAAGGCCGGTCCGCTGCGCGATGGCGTCGATCTGCTGCTCGATCTCC10.7246376811594203No Hit
AGCCACGGGTGCCGACTTGCGAGCTGCCTTGGTGGCGAGTTGCTTACGAG10.7246376811594203No Hit
AGGCGATGACGCGGGCCGTGAAGGTGGAGGCGTTCATGCCGTGCTCGGCT10.7246376811594203No Hit
CCCCTCTGGGTGTGCAATACCACTCGTGTCTGGCAATCCATTTTCTTGAA10.7246376811594203No Hit
GAATCAATGAAAAATAATAACTACAACAACTTTTCAAGATATAGATGATA10.7246376811594203No Hit
TTGTTGGGGTAATGCAGAGCATGAATTTAAATTTGAAGAAGAGAATTTTA10.7246376811594203No Hit
CGCCTGGATGGTCGTCGTCACCCTGCTGCCGCTTGGCATCCTGCAGCTAT10.7246376811594203No Hit
CCAGGAACCACTACCTGGCCGACAGCAACGCTAGGCACAACCGGCATGTG10.7246376811594203No Hit
ATCTGAGAATGGTAAGTTGAGCAGTCTCCTCTTAGTTTACCGATATGCAG10.7246376811594203No Hit
CAGGGGCAGGAACATTGGCCACAGGCCTTAATTCCACATGAACTGCTGCA10.7246376811594203No Hit
ACATATGTCCAAACAAAAACTTGTACATGAATTTTTACAGCAGTATTTTT10.7246376811594203No Hit
GTTATGGGCAAGTAGACGGCGACAGTGCAACAGTTGCCGAGCTTTCTGCA10.7246376811594203No Hit
GCTTACCTTTAATAGTATCAGCACCATGTTCTTCTACGTTTTCAATGAAT10.7246376811594203No Hit
GCAATGACACATGCAGACTGGTTCCACGTCACAAAACTGCCCCTGGCTGC10.7246376811594203No Hit
ACTTAATAATGCACGTTTAATTTTGGCTTCATCGTAGGGATGCAAAACTG10.7246376811594203No Hit
GAGCAAAGCTTTGTCTTCACCAACGTGACCGAAGCCCCCGTGCCTTCGCT10.7246376811594203No Hit
CTTAAAATTTAAAAATATTCATACTAAAGAGGACTTCAAAGAGGTTACAA10.7246376811594203No Hit
CTGTAGTATTCTCTGATGATAGTTTGTATTTCTGTGGGATCAGTGGTGAT10.7246376811594203No Hit
CCTTCATGAATAAATTAGAAGTGAAAGTTTAACTGATCCCCTTGCATTTT10.7246376811594203No Hit
GAGCCGGGATCACGCCACTGTACTCCAGCCTGGGCAACAAGACTGAAACT10.7246376811594203No Hit
GTATAATACGCCTCACACTCATTCTCAACCCCCTGACAAAACACATAGCC10.7246376811594203No Hit
GAAGATTGTGATTGGGCGAGCAGGGATGTTACCAGCTTTGATGTCAAGGT10.7246376811594203No Hit
CATTTTAAATAAATTAAAATTTATAGGGATAGAGATAGCAAAGGTCATCA10.7246376811594203No Hit
ATATAGGATAGTTAAGAATATGTTTATGCTGAATAAATTTCATCGTTCAT10.7246376811594203No Hit
TGAAACGCCTGTCGGATGAGTCTTCAGGCGGTCGCTCGAAGATCCGGGTC10.7246376811594203No Hit
ATCCACCCCAGTGCCAGATCCCCTAGGTCTGTGAACTCGCTGTCAGGAGA10.7246376811594203No Hit
AGATTTAGATTTCATTAATGAAGATGTAAAACAATCTTCCCATAAAATTT10.7246376811594203No Hit
GAGCAGCCCCGGCTTTCGCCGGGGCGACGGAAACATTGGGTGGTCGACCG10.7246376811594203No Hit
GGAATACAACACTATGAAGAGGTGAAAAGCAATATAAATATGACTTTAAC10.7246376811594203No Hit
GTGTCTAGGTTGGCATTTTCAACCAGCGGGATCACTTGTGCGCCGTACTT10.7246376811594203No Hit
GGTGCGGACCAGGGGAATCCGACTGTTTAATTAAAACAAAGCATCGCGAA10.7246376811594203No Hit
TCTGTCAATCCTGTCCGTGTCCGGGCCGGGTGAGGTTTCCCGTGTTGAGT10.7246376811594203No Hit
CACCTGGTGCATTCTGATCACTTGATGAAATCATGCATGGATGAAGAGTC10.7246376811594203No Hit
AAACCCAAAAGGTCAGAAGGATCGTGAGGCCCCGCTTTCACGGTCTGTAT10.7246376811594203No Hit
ACCTACAAGATTCCCTCAACGCCGCCATGACCCGCCCAAAGCAAGGCCCG10.7246376811594203No Hit
CTAAAGGCTCTGAGAAGTCCTGTAGTAGAGAAACTTTTTCAAATGTTTTC10.7246376811594203No Hit
CAACACTTTAAAATACAAGATGCTACAAGCCTAAGTTGTCCCTCAGGGAA10.7246376811594203No Hit
AATTAGCTTAGCTGGCATGGTGGCATGGGACACTAGGCCAGGAGAATCTT10.7246376811594203No Hit
GTGTAGGTGGCGAAACCGGAGTACCAGTGCGAGACCATGGCGGAACTGAC10.7246376811594203No Hit
GAATACGATTTTTCTCCGTTGACGGTGATGATATCTCCGGCAATGGCGAC10.7246376811594203No Hit
GGCTGGAGACTCAGGAAAAAAACTGATGTTGCAGTTCAGCTCTGAGGCAG10.7246376811594203No Hit
CCTTAACATCACAATTAAAAGAACTAGAGAAGCAAGACCAAACACATTCA10.7246376811594203No Hit
TTTGACAGGTGTACCGCCCCAGTCAAACTCCCCACCTGGCACTGTCCCCG10.7246376811594203No Hit
CAATGGCTCAGTGCCCACAATTCTACCATTCATTTCTGAAAGTGTTTTAG10.7246376811594203No Hit
GCAGTGTGCTACTCGCACTGATCGGATGATCCGGGTTGTCAAAGTCACTG10.7246376811594203No Hit
AGAATTAATACATGCCGACGGGCGCTGACCCCCTTCGCGGGGGGGATGCG10.7246376811594203No Hit
ACCCAAGTTGGCCCATGCTTTCGACTGTCGATGTCGGGTGATGTGCTGGG10.7246376811594203No Hit
GTCGGCCAGTTCAATGAGGGTCTTCGTCTCAATCGGAGTACCGGTGCGTC10.7246376811594203No Hit
GTTTAAATCCAATGCATTATTATGGCCACTTTCTATGTTTGCCATTTTAT10.7246376811594203No Hit
CCTATTCTCATGTTAGCGATGGGAATACTCAATTATGTACGGGATAATGT10.7246376811594203No Hit
AGCTGCGACCTACATCGTCCCGCTAAATATCTACTCGAAAAAGTACCAGC10.7246376811594203No Hit
GGCCGACACCGTTAAGGGGAAGGCGGGACAGTCCTTCCGCGATCACCTCG10.7246376811594203No Hit
ATATGGCTCTCACCAGCAGGCTTCCATATTAGGCACACACACACACACAC10.7246376811594203No Hit
TTTCTGAGATTGCTTCTGTCTTGGTTTTATGGGGAGATATTTCCATTTCT10.7246376811594203No Hit
AAATAGTAGAAATTTTGTGGTACTTTTTCAGATTTAACTCACTGTTTCCC10.7246376811594203No Hit
ATGCCTCTACTGTGAGAAGGGCAGTACAGTCTGGTCATGTCAACCTCAAG10.7246376811594203No Hit
TTCCATAGCAATCGAGAGCCACGAAGAGGACGAGCGGGGCGAGAACCTTC10.7246376811594203No Hit
TTGCGACATCAGTGTTCTGAGGAATGCATTTTTGGGAAATTAAAACATTA10.7246376811594203No Hit
GGGCCTCAAGGAGGGATACGAGGTCACCGGCGGCGTATTCATCCCTGATG10.7246376811594203No Hit
GTTTGATGCTGCAGCAGTTGGATTGTGTTTTAGTAATTGTTTGCATGTGT10.7246376811594203No Hit
GGCTGGCACTGACGCTAAGGTTGCCCGGTTGCGTGAGCTCGGCTTCGACG10.7246376811594203No Hit
AGTAGGTACAGAGCGACTCACGGCAGGCGTATTCGTTCTGGGTGTTTGAT10.7246376811594203No Hit
ACTATGAACATCTTCACATCCATAAACTAGAAAACCTACAGGAGATCGAT10.7246376811594203No Hit
GGTGAAACCTCATCTCTAATACAAAAATTAGCTGGGTGTGATGGTGTATG10.7246376811594203No Hit
GCCATAAACTATTAAAGAAATGTTTGCTCTGAAACAACCTGATATGACTT10.7246376811594203No Hit
TGTTATAATTCTACTACAATTTATGACAGTGAAGAGAAAAACAGTGGAAG10.7246376811594203No Hit
GTCTGGAAATGATATTGCATCCAAGGAGAAATCTGGGATGAAAGCTGGCG10.7246376811594203No Hit
AGCACGTCGACGGGGCCGAATGCCTTTTCGGCGGCGTCGAGGGCGGCAAC10.7246376811594203No Hit
GGTATCAACGCAGAGTACATGGGATTCCTGAAGCTGACAGCATTCGGGCC10.7246376811594203No Hit
GTATTGTTCAGCTAAAACTGGATGATACTATTGACTTGAAACAAAATTTG10.7246376811594203No Hit
GGCCGGACCATTGTTGTCGTAAAGGATATTTGAATTAGGGTTGTAGTCCT10.7246376811594203No Hit

[OK]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)