FastQCFastQC Report
Thu 1 Sep 2022
EGAF00003674075

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00003674075
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences93
Sequences flagged as poor quality0
Sequence length140
%GC56

[OK]Per base sequence quality

Per base quality graph

[FAIL]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[FAIL]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[FAIL]Overrepresented sequences

SequenceCountPercentagePossible Source
ATCGCACGCCCCCCGTGGCGGCGACGACCCATTCGAACGTCTGCCCTATC22.1505376344086025No Hit
ATGGAATGCTCTCTGCAGGCCAAGCCCGCAGTGCCTACGTCTAAGCTGGG22.1505376344086025No Hit
GTACTTCACCAATGGCCATCTGTATCCAACTGGTTCTAAGTCAAAGCGGG22.1505376344086025No Hit
GGCTCTAGGTCACCCTAGAGGCCTAGGCTGGCTGTCTTCAGGTCAGGGGG22.1505376344086025No Hit
ACTACATCTAGGACGCCTCCGGTGAGCAGGTGTGATCCCAGGGCCCCTGA22.1505376344086025No Hit
AGCGGCCGCCGCCCCAGGGCTCGCCCGGTCCTGTCTCCGTCCCTGAAGCG22.1505376344086025No Hit
GTATCAACGCAGAGTACATGGGTACCTGGTTGATCCTGCCAGTAGCATAT22.1505376344086025No Hit
CCCATGAGCAGGGCTCCCACAATCACCACGACGATGAGGACCACCACCAC22.1505376344086025No Hit
CCGCCGGACTACTCCGCAGCTCCCCGGGGCCGATTTGGCATTCCCTGCTG22.1505376344086025No Hit
CAGAAGTGCCGAAAGAGCACTGGACTCCGGAAGGACACAGCATTGTTGGT22.1505376344086025No Hit
CCACGAGGCCAGTGGAGCCGATGGAGAAGGTGGCAGTGGTAACCAGGTGC22.1505376344086025No Hit
CTTGTGCCCAAAGTTTGATTTCTCGCAGACCAGGAGGACCCATTGGACCC22.1505376344086025No Hit
CTCCGGCCCCGGCCGGGGGGCGGGTGCCGGCGGCTTTGGTGACTCTAGAT22.1505376344086025No Hit
ATCAGATACCGTCGTAGTTCCGACCATAAACGATGCCGACCGGCGATGCG22.1505376344086025No Hit
AGGTAATCAGTGACAGTTGAAGATTTTTTTTTCCCAGAGCTTATGTCTTC11.0752688172043012No Hit
GACTACTCCGCAGCTCCCCGGGGCCGATTTGGCATTCCCTGCTGCCCCTG11.0752688172043012No Hit
AGATAACCTCGGGCCGATCGCACGCCCCCCGTGGCGGCGACGACCCATTC11.0752688172043012No Hit
CTGTGGTAATTCTAGAGCTAATACATGCCGACGGGCGCTGACCCCCTTCG11.0752688172043012No Hit
TACACAAACCCAGCAGTGGCAGCCACTTCTGCCAACTTGTAGGGGCACGT11.0752688172043012No Hit
GGTCATGGGAATAACGCCGCCGCATCGCCGGTCGGCATCGTTTATGGTCG11.0752688172043012No Hit
TCCCCAGTCTTGAGGCTCTCACTAGAAAAGTCCACAACTTCCAGATGGAA11.0752688172043012No Hit
GGAGAGGAGAGCATAGCACCTGCAGCAAGATGGATGTGGGCAGCAAAGAG11.0752688172043012No Hit
GCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTTTTGGGTTTTTGGAA11.0752688172043012No Hit
CCCCGTGGCGGCGACGACCCATTCGAACGTCTGCCCTATCAACTTTCGAT11.0752688172043012No Hit
GATGGAGCCCGCCGGACTACTCCGCAGCTCCCCGGGGCCGATTTGGCATT11.0752688172043012No Hit
GTAGTAGAGCGGCACCTCGCCACACAGCTGTCTCTTATACACATCTCCGA11.0752688172043012No Hit
TCAGGATGGAGTGGAGGTGCGGGGTGGTGCAGGACTGAGTCAGGACCTGT11.0752688172043012No Hit
CCGCCCGGGGCCGGAGAGGGGCTGACCGGGTTGGTTTTGATCTGATAAAT11.0752688172043012No Hit
GTGTTGGAGATTGAGACTAGTAGGGCTAGGCCCACCGCTGCTTCGCAGGC11.0752688172043012No Hit
GACCACAGGCGTGTGCCACCACGTCTGGCTCATTAAAAACAATTTTGTTT11.0752688172043012No Hit
CCATTTCTCCAGGGCTTGTCCCTGCGGTGTGGGCAGACTGTCTCTTATAC11.0752688172043012No Hit
CGTTAAAGGATTTAAAGTGGACTCATTCCAATTACAGGGCCTCGAAAGAG11.0752688172043012No Hit
GTGTGGGACCATGTCCAGCCCTCTCCAGTGTATCCACAGCCCCGACCTTT11.0752688172043012No Hit
CTCTTGCCCCTGCCGAGCCCTGCATGCCTGGGGCACCTACTTCTCCTTTG11.0752688172043012No Hit
AGCTTGGGGAGAGGATGGGAGTGGGCAGAGGTGGCGCCCAGGGGCTGTCT11.0752688172043012No Hit
ACTCAGGGCCAGGCGTTGCTGGGCTTCCGGCGCCCCAATGCTCCTGTCTC11.0752688172043012No Hit
GTAGTGGCTGCCGCCGCCCCACTGACCAGCAGGAGATCCACCAAGGCCCA11.0752688172043012No Hit
CTGCGGGCTTGGCATGCAGAGAGCATTCCATCTGGAAGTTGTGGACTTTT11.0752688172043012No Hit
TGTCCCTGCGGTGTGGGCAGAAGCAGCTTCTTGCCCGTCTGCAAAAGCTG11.0752688172043012No Hit
GGTTTGGGCAGGGGGTCTGACATCCCTGGCTCCTGCTCTGGCTCTGGCTG11.0752688172043012No Hit
TTGACATTGAGTATTCCAGACATAATGCCAAAGTCTTCTGGAGGGAAGGA11.0752688172043012No Hit
AAGCAGGCCCGAGCCGCCTGGATACCGCAGCTAGGAATAATGGAATAGGA11.0752688172043012No Hit
ATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTAAA11.0752688172043012No Hit
GTTTTCTCCTTCATTACAGAAACGGCTTTTTCAAAAATATGGTATTGATA11.0752688172043012No Hit
CCATAGTAGGCACGGCGACTACCATCGAAAGTTGATAGGGCAGACGTTCG11.0752688172043012No Hit
GCCGGAAGCCCAGCAACGCCTGGCCCTGAGTGAGCACCTGGTTACCACTG11.0752688172043012No Hit
CTCAGGGCCAGGCGTTGCTGGGCTTCCGGCGCCCCAATGCTCATCTCCAG11.0752688172043012No Hit
GGGGTTTCACCATGTTGGCCAGGCTGGTCTCAAACTCCTGACCTCAGGTG11.0752688172043012No Hit
CGGGAAAGGAAACGCCCCGGGCAAAGGGTCTTTTGTAGCTTTTGCAGACG11.0752688172043012No Hit
CGGGAAACCTCACCCGGCCCGGACACGGACAGGATAGACAGATTGATAGC11.0752688172043012No Hit
CCCGTATCCAGGATGGCAGCACAGCCCTTGGCACAGAGAGTCAGCCCTGG11.0752688172043012No Hit
CCTGAAACGCCTTCTTATCGTGGTGGTGGTGGTGGTCCTCATCGTCGTGG11.0752688172043012No Hit
GGTCAGGGGCACATCCCTCCCACTGGCATCGGTTCCTACCCCACAAGGGG11.0752688172043012No Hit
GTCTTGAACGCCTGACCGCAAGAGATCCTCCTGCCTCAGTTTCCCAGAGT11.0752688172043012No Hit
GGTATCAACGCAGAGTACATGGGAGGAGAGGAGAGCATAGCACCTGCAGC11.0752688172043012No Hit
CTGTTGTGGCAGGAGTTCCCGAGCCCCTGGGCGCCACCTCTGCCCACTCC11.0752688172043012No Hit
GCAAAGAGGTCCTGATGGAGAGCCCGCCGGACTACTCCGCAGCTCCCCGG11.0752688172043012No Hit
GCCCCGGACATCTAAGGGCATCACAGACCTGTTATTGCTCAATCTCGGGT11.0752688172043012No Hit
GTGCAGCGATGCCGGGAGATTTTCTTCCCAGAGACAGCTCATGAGGCGTG11.0752688172043012No Hit
CTGCGGGCTTGGCCTGCAGAGAGCATTCCATCTGGAAGTTGTGGACTTTT11.0752688172043012No Hit
CTCTGGGACAGTGTTTTCCCCGCTTTCCCGTTTTGGCTTTCTGCAGACAC11.0752688172043012No Hit
GATGCCGTTTGAGTCAGTCTGGTTCTGGAAGAAGTCGATGACCAGGGGGA11.0752688172043012No Hit
ACACTGCTCTTTTCCCCGACCTGCGGGCTCCCCTCGGTACCAGTTGGTGT11.0752688172043012No Hit
CAGCAGGATGGCCGAGGACCTCATCCTCTACTGCACCAAGGAATTCAGCT11.0752688172043012No Hit
TCTTGCCACAGCCTCCCAGATAGCTGGGACCACAGGCACATGCCACCCCG11.0752688172043012No Hit
CGTCTAAGCTGGGCCAGGCAGAGGGGCGAGATGCAGGCTCAGCACCCTCC11.0752688172043012No Hit
GCTTGTAGGCGATCAGCAGCTGCTGGTAGTCATACACCACGAGGCCAGTG11.0752688172043012No Hit
CTCTAGATAACCTCGGGCCGATCGCACGCCCCCCGTGGCGGCGACGACCC11.0752688172043012No Hit
GATTAGAGTGTTCAATTACAATACTCTGGAGAGAGTTCATATGTTTGAAG11.0752688172043012No Hit
GGTGACCACGGGTGACGGGGAATCAGGGTTCGATTCCGGAGAGGGAGCCT11.0752688172043012No Hit
GTATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTATA11.0752688172043012No Hit
GGAATGCTCTCTGCAGGCCAAGCCCGCAGTGCCTACGTCTAAGCTGGGCC11.0752688172043012No Hit
CTTCATGTCCCCGCGGTCGAAGACGGCCACATACGTCCCCAAGAAGACGT11.0752688172043012No Hit
GGTATGGCCTGCTCGCTGCTGTTCCCGGCCTGGGTGGTCACGGACATGCA11.0752688172043012No Hit
CTCCAATGGATCCTCGTTAAAGGATTTAAAGTGGACTCACTGTCTCTTAT11.0752688172043012No Hit
CAGCACCCTCCGGAGGGGACCCGGCCTTCCTGGGCATGGCCGTGAGCACC11.0752688172043012No Hit
GTGTTGAGTCAAATTAAGCCGCAGGCTCCACTCCTGGTGGTGCCCTTCCG11.0752688172043012No Hit
CCTAAAAGATCACACAAAAGTTGGGAAGAGAAGGATGTCAATTAGACTAC11.0752688172043012No Hit
GGCCCTGAGTGAGCACCTGGTTACCACTGCCACCTTCTCCATCGGCTCCA11.0752688172043012No Hit

[FAIL]Adapter Content

Adapter graph