FastQCFastQC Report
Thu 1 Sep 2022
EGAF00003674076

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00003674076
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences93
Sequences flagged as poor quality0
Sequence length140
%GC56

[OK]Per base sequence quality

Per base quality graph

[FAIL]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[FAIL]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[FAIL]Overrepresented sequences

SequenceCountPercentagePossible Source
GCCCAGTGCACCTGAAACGCCTTCTTATCGTGGTGGTGGTGGTGGTCCTC22.1505376344086025No Hit
AACCAGACAAATCGCTCCACCAACTAAGAACGGCCATGCACCACCACCCA22.1505376344086025No Hit
CCCCCGCAGGTGGTGACCCCGACATGATCAAGGCAGTGAAGGAAGCGCGA22.1505376344086025No Hit
GTTATCTAGAGTCACCAAAGCCGCCGGCACCCGCCCCCCGGCCGGGGCCG22.1505376344086025No Hit
GTCCTCAAGATACAATAACTTGCCAATCCACGGGTCATAGGTAAAATAGT22.1505376344086025No Hit
GTGTCCATCCAGACGGGCTACCTCATCCAGAGCACAGGGCCCAAGAGCTG22.1505376344086025No Hit
CTCCTCCACAGCCCGGGCAGGTGGCCCGAGCGCTCCTCCGCTGCTGATCA22.1505376344086025No Hit
GTGCAGAGCTAAGGACACAGTGGAGATTCTCTGGCACTCTGAGGTCTCTG22.1505376344086025No Hit
GTTGTACACTGGCTTAGGAGCCCCCTCGGAAGAGCTGCATCTCAGTGCAG22.1505376344086025No Hit
GCAAAGAGGTCCTGATGGAGAGCCCGCCGGACTACTCCGCAGCCCCCCGG22.1505376344086025No Hit
CTCTGGAGCTATCTTCATGATGTAGCAGCAGGTGCCAGGGGCTGGCTTGT22.1505376344086025No Hit
GCTCACGGCCATGCCCAGGAAGGCCGGGTCCCCTCCGGAGGGTGCTGAGC22.1505376344086025No Hit
GTCCTGTATTGTTATTTTTCGTCACTACCTCCCCGGGTCGGGAGTGGGTA22.1505376344086025No Hit
GCCACCTTCTCCATCGGCTCCACTGGCCTCGTGGTGTATGACTACCAGCA22.1505376344086025No Hit
TACTTAGACATGCATGGCTTAATCTTTGAGACAAGCATATGCTACTGGCA22.1505376344086025No Hit
GTGACATTGTGTGAAGATTGAATAGTACATAATATGCTGTATTAGAAGTG11.0752688172043012No Hit
AGATGGATGTGGGCAACAAAGAGGTCCTGATGGAGAGCCCGCCGGACTAC11.0752688172043012No Hit
CGCTATTGGAGCTGGAATTACCGCGGCTGCTGGCACCAGACTTGCCCTCC11.0752688172043012No Hit
GCTTTATTCTGTTGTGGCAGGAGTTCCCGGGCCCCTGGGCGCCACCTCTG11.0752688172043012No Hit
TCCTTCCAGTGTCTGCACACATGTTTTATTCTGATAATCCCATATTTTAA11.0752688172043012No Hit
GCACCTTAGGAGGCCGAGGCAGGAGGATCCTTGAGGTCAGGAGTTCGAGA11.0752688172043012No Hit
GATCAGATACCGTCGTAGTTCCGACCATAAACGATGCCGACCGGCGATGC11.0752688172043012No Hit
GGAAACGCCCCGGGCAAAGGGTCTTTTGCAGCTTTTGCAGACGGGCAAGA11.0752688172043012No Hit
GTGCCCGACAAATGGGCTGGGCCTTGGTGGATCTCCTGCTGGTCAGTGGG11.0752688172043012No Hit
TTCTTGGACCGGCGCAAGACGGACCAGAGCGAAAGCATTTGCCAAGAATG11.0752688172043012No Hit
ACTGAGAAGTGTCCGAGAAATTGGTGGGGCCTCTGAAGGAGGCTGTGAGC11.0752688172043012No Hit
GGTACATGGGATGCCCCTCATTTACATAAATATTATACTAGCATTTACCA11.0752688172043012No Hit
CTTCCGAGTAGCTGGGACCGCAGGCACACACCATCATGCCTGGCTAATAT11.0752688172043012No Hit
GGGCAGCAGGGAATGCCAAATCGGCCCCGGGGAGCTGCGGAGTAGTCCTG11.0752688172043012No Hit
ATTCTGTAATGCTGGGTAAAAATAATTATTGACTTGAAAGATTTCGAGAA11.0752688172043012No Hit
GCAATTCCCCATTCCTCTCCCCTATTGCTGGCTCTGCAGGGCTCTGATCA11.0752688172043012No Hit
GTGCTCACGGCCATGCCCAGGAAGGCCGGGTCCCCTCCGGAGGGTGCTGA11.0752688172043012No Hit
GCCTGGCCCAGCTTAGACGTAGGCACTGCGGGCTTGGCCTGCAGAGAGCA11.0752688172043012No Hit
GCCTACTGGCAGATCCACATGGAGCGTGTGAAGGTGGGCCCAGGGCTGAC11.0752688172043012No Hit
TCGCCACACAGGGTGCTCACGGCCATGCCCAGGAAGGCCGGGTCCCCTCC11.0752688172043012No Hit
GTTGGGGGACGCCGACCGCTCGGGGGTCGCGTAACTAGTTAGCATGCCAG11.0752688172043012No Hit
GCTCCCATTTCTCCAGGGCTTGTCCCTGCGGTGTGGGCAGAAGCAGCTTC11.0752688172043012No Hit
CCACGGGTGACGGGGAATCAGGGTTCGATTCCGGAGAGGGAGCCTGAGAA11.0752688172043012No Hit
TCCGGGCCCTGCATGCAGCCATTGGGGGAATCCCCTTGCTGGCTGGGGAG11.0752688172043012No Hit
GTGGAGCCGATGGAGAAGGTGGCAGTGGTAACCAGGTGCTCACTCAGGGC11.0752688172043012No Hit
GTAGACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTCGACAAAAAA11.0752688172043012No Hit
CTCTTAATCATGGCCTCAGTTCCGAAAACCAACAAAATAGAACCGCGGTC11.0752688172043012No Hit
CCATGGTAGGCACGGCGACTACCATCGAAAGTTGATAGGGCAGACGTTCG11.0752688172043012No Hit
CACACGGAGATGGTTCTGGAGATGAGCATTGGGGCGCCGGAAGCCCAGCA11.0752688172043012No Hit
ATTGCAAGCTTCGTGAAGAAGTACAACACATATGCCTATGTAGGCCTGAC11.0752688172043012No Hit
TCTGCCCACACCGCAGGGACAAGCCCTGGAGAAATGGCTGTCTCTTATAC11.0752688172043012No Hit
GTCCTGACTCAGTCCTGCACCACCCCGCACCTCCACTCCATCCTGACTGT11.0752688172043012No Hit
TGAGTCCACTTTAAATCCTTTAACGAGGATCCATTGGAGCTGTCTCTTAT11.0752688172043012No Hit
GTACATGGGGGTCGGCGTCCCCCAACTTCTTAGAGGGACAAGTGGCGTTC11.0752688172043012No Hit
TCCTGGAGCAGGAGTGCAACGTCCTCCCCTTGAAGCTGCTCATGCCCCAG11.0752688172043012No Hit
CTCCTCTCCTACTTGGATAACTGTGGTAATTCTAGAGCTAATACATGCCG11.0752688172043012No Hit
GTACATGGGGTCTTTGTGGCTCCGGAAAGGCGTTTGGGATGCCAACGATG11.0752688172043012No Hit
CTGTGTGGCGAGGTGCCGCTCTACTACCTGTCTCTTATACACATCTGACG11.0752688172043012No Hit
CCTGCTGCCTTCCTTGGATGTGGTAGCCGTTTCTCAGGCTCCCTCTCCGG11.0752688172043012No Hit
ACCTGGAGCACGGCACTCATAGTGTCTGACACTTCAAACACAGCTTCCTT11.0752688172043012No Hit
GGCCAGCGGAGCCGATGGAGAAGGTGGCAGTGGTAACCAGGTGCTCACTC11.0752688172043012No Hit
GTCGCCCAGGCACTGCAGCCTGGACCACCTCATCCTTGGCCTGTTCCCAG11.0752688172043012No Hit
GCGGACCGCCCGCCCGCTCCCAAGATCCAACTACGAGCTTTTTAACTGCA11.0752688172043012No Hit
CCTGGGCTGCTGGTTCCGTTGACTAGGGTCATCTTGATCTCTGCAGTTTG11.0752688172043012No Hit
CATCGTCGTGGTGATTGTGGGAGCCCTGCTCATGGGTCTCCACATGAGCC11.0752688172043012No Hit
CTTTTAAGATGCCAGATTCTTTTTTGATTAAATGTTGCAAAATCGCAAAA11.0752688172043012No Hit
AACCATCTCCGTGTGTTTCTGGCTCATGTGGAGACCCATGAGCAGGGCTC11.0752688172043012No Hit
CCACCACCACGATAAGAAGGCGTTTCAGGTGCACTGGGCAGCAGGGAATG11.0752688172043012No Hit
ATATCACCTTATGCCAGTCAGAATGGCTATTAGAATTATATGAGAATAAT11.0752688172043012No Hit
GCTGCAGGGCAAGCAGGGATGCCTGGACAAGCTGGTCCAGTTGGGCCCAA11.0752688172043012No Hit
GTTCAAGACCAGCCTGACCAACAGGATGAAACCCCCATCTCTACTAAAAA11.0752688172043012No Hit
CCCCTGGGCGCCACCTCTGCCCACTCCCATCCTCTCCCCAAGCTCTGTCT11.0752688172043012No Hit
CTGCGGAGTAGTCCGGCGGGCTCTCCATCAGGACCTCTTTGCTGCCCACA11.0752688172043012No Hit
GAGCATCGAGGGGGCGCCGAGAGGCAAGGGGCGGGGACGGGCGGTGGCTC11.0752688172043012No Hit
GTCAATCTATATTCTAAAATAAAAAGTTTCTTTCTAAAAAAAAAAAAAAA11.0752688172043012No Hit
ACTCTGATACCAGAGTGCAGCCATGCAGATGGTTATTCCAGCTCTGGTCA11.0752688172043012No Hit
GAGCATTGGGGCGCCGGAAGCCCAGCAACGCCTGGCCCTGAGTCTGTCTC11.0752688172043012No Hit
GCCATGCCCAGGAAGGCCGGGTCCCCTCCGGAGGGTGCTGAGCCTGCATC11.0752688172043012No Hit
CTGCAGTGATTCTCCTGCGTTCAAGTAATTCTCCTGCCTCGGCCTTCTGA11.0752688172043012No Hit
AATCATAGCTGACTGTAACCTCAAATTCCTGGGCTTGACCAGGCTCAGTG11.0752688172043012No Hit
GGGCAGGCAGGCAGGGCAGGCTAGATCTCGTACCGATACTTGAGCACGCC11.0752688172043012No Hit
GACGTAGGCACTGCGGGCTTGGCCTGGAAGTTGTGGACTTTTCTAGTGAG11.0752688172043012No Hit
GGTCTGATAAGAGACACCGGCATACTCTGCGACATCGTATAACGTTACTG11.0752688172043012No Hit

[FAIL]Adapter Content

Adapter graph