FastQCFastQC Report
Thu 1 Sep 2022
EGAF00003674086

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00003674086
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences91
Sequences flagged as poor quality0
Sequence length146
%GC48

[OK]Per base sequence quality

Per base quality graph

[FAIL]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[FAIL]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[FAIL]Overrepresented sequences

SequenceCountPercentagePossible Source
AATATGAGGTCTTCTGGTTTTGAAGATGTGGACAAGGATTGTATCAAGGT33.296703296703297No Hit
GGCCGGCACCGCGACGACCACCGAACGCTGGCGCGCCTCGCCCGCGACCT33.296703296703297No Hit
TCACCGTGCCAGACTAGAGTCAAGCTCAACAGGGTCTTCTTTCCCCGCTG33.296703296703297No Hit
TAAGTGAAGTGAGCGAAACAGAAGTGAACACACTGGGACTCTGGTCCACA33.296703296703297No Hit
CTCCCAAGTAGCTGAGATTACAGAGGTGTGCCACCACACCCAGCTAATTT33.296703296703297No Hit
ATCGAGATCTGCACGAAGCGCGAGCTGTCGTACGGAATGGCCCACTTCAC33.296703296703297No Hit
ACACACACAACACAAGGAAGTTACTGGGAATTCTTCTGTCTAGCCTGATA22.197802197802198No Hit
ATAGTAGGTAGGGACAGTGGGAATCTCGTTCATCCATTCATGCGCGTCAC22.197802197802198No Hit
TCGGGCAGCCGCAGGCGCAGGTGGTCGAGTCGGGCTCGTGACGGATCTCG22.197802197802198No Hit
CCAATAGAAGGGCAATGCTTTTAGATTAAAATGAAGGTGACTTAAACAGC22.197802197802198No Hit
CCCCTGCACTCGTGTTGATTCCATTCCATTCCATTCCATTCCATTCCATT22.197802197802198No Hit
GTATTTGGAAGTGGGGCTTTTAGGAATAGATGAGGTCATGAGGAGGCTGG22.197802197802198No Hit
GTCACAGGCGGTGTGCTCCATCGGCAATATTTTACTCATGCAGGCGCATT22.197802197802198No Hit
ATCTTCTACGAGCGAGGCGACGTGCTGACCGTCTCCACGCATGCCGACCC22.197802197802198No Hit
GCACTCAAACCTGGGCAACAGAGTGAGACCCTATCTCAAAAAAAAAGAAA22.197802197802198No Hit
ATCATAAGGTGAGGTTCCACAAGAGGCCATCTACAAGTTGAGAACCAAGG11.098901098901099No Hit
CAAGCAATCCTCCCCTTGGCCTCCCAAAGTGCTGGGATTACATGTGTGAG11.098901098901099No Hit
CTAATAGGGAATAGGGGAAGAAGGGGAATACAGTTTTTCTGTGTCTCAGA11.098901098901099No Hit
GGATGATGCTGGCCTCATAAAATGAGTTAGGGAGGATTCCCTCTTTTTCT11.098901098901099No Hit
TGCTATTAGTATAGCTGATCACTAGGCAAAAGAAAGGTTTGGGTCTAATA11.098901098901099No Hit
TACCAGTGGAACGTTATGCCGTAGTCTGTCGGTATGCTGTCCACTGCTCC11.098901098901099No Hit
TCTGTAAACCGATCCCCCATGGTTGTCAGCAGCTCTCTCAAGTAATCGTC11.098901098901099No Hit
CTAAAGAGCAACAGCAGGTGGCTACCCAGCAGTTGGCTTTTCAGCAGCAG11.098901098901099No Hit
GCTGGCAGCTGATTAGATGGTGCCCACCCAGATTAAGGGTGGGTCTGCCT11.098901098901099No Hit
ATATTGTCTTAGATGTTGTCAACCAAGAAACATTTATGGTAAGGAGAGCT11.098901098901099No Hit
GCTTCCCCAGTGTATGTGGAGAGAAATCAAAACAACCTATTGAGGCTTTT11.098901098901099No Hit
TCCCTGCAGTATAGCTTGAAGTTGGGTAGCATGATACCTCCAGCTTTGTT11.098901098901099No Hit
GCTGAGGAGTGCTTTACTTCCAACTATGTGGTCATTTTCGGAATAAGTGT11.098901098901099No Hit
GTATTGCCCGGAATATCCGGCTGATAAAGCGCGATGCGCAGGTCGGTTTT11.098901098901099No Hit
ATCTCAACCTGCGTGCAACCGACCATCCCGAATTCGACGCCTGGCGCTGG11.098901098901099No Hit
GTGCTCGGATTACAGGCATGAACCACTGCGCCCGGCCTTGCTCATCAGCT11.098901098901099No Hit
GTGCTCGGATTACAGGAATGAACCACTGCGCCCGGCCTTGCTCATCAGCT11.098901098901099No Hit
ACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTGGTA11.098901098901099No Hit
TATCAGGACCATCTGCCGCTCTACCGTCAGGAAGGCATCTTCGGTCGGGC11.098901098901099No Hit
TTATTACTATGTGCTAGTGTTTCATGACTTCCTCAGATTATTCAAATGGT11.098901098901099No Hit
GTGCTCACCGAATGGCTGGTGGACACCGCGCGCCATGCCGGCTATGCGGC11.098901098901099No Hit
GGCGGACCCCGCCCCGGGCCCCTCGCGGGGACACCGGGGGGGCGCCGGGG11.098901098901099No Hit
GCTAAGAGCATCGAGGGGGCGCCGAGAGGCAAGGGGCGGGGACGGGCGGT11.098901098901099No Hit
CCAAGTAGAAAAAACTCAGATAGACACAACATAATCAAACTGCCAAAAAC11.098901098901099No Hit
TCCTGATACCAAAGCCTGGCAGAGACACAACAAAAAAAGAGAATTTTAGG11.098901098901099No Hit
TCTGTAAACCGATCCCCCATGGTTGTCAGCAGCTCTCTCAAGTAATCTTC11.098901098901099No Hit
AGACCCTGTCTCTACAAAAAAAAAAAAAAAAAAAGAAAGAAAAAAAGAAA11.098901098901099No Hit
AGGTTTAAGAAACAGGAAACACAACGTTAAGTCTCGGAAATAAAATGTTT11.098901098901099No Hit
AACAGAGTGTTTCCAAACTGCTCTATGAAAAGAAAGGTTAAACTATGTGA11.098901098901099No Hit
AGTCTTGAAGTGGGACTTATGATTGAAACGAAGGGTTTGAGAGAAAGTAT11.098901098901099No Hit
CCAAATGCTAATGGGACAATGTTTGCAATATTTTCTATCCTAGTTTAGTT11.098901098901099No Hit
CATTTAAAAACATCGAGTACCTCAAGTCAGTTTGCCTTGAAAAATATCAA11.098901098901099No Hit
AGAAAAAATAGGCTGCTTTGCACCTTAAGTGCTCCTCTGTCTTCTCTCCT11.098901098901099No Hit
GGCTTAATTTGACCCAACACGGGAAACCTCACCCGGCCCGGACACGGACA11.098901098901099No Hit
CAATTCTCTTGCCTCAGCCTCCTGAGTAGCTGGGTCTACAGGTGCATGCC11.098901098901099No Hit
CCTTGATGCCATGATGAATGAGGCCCCAGGGCCCATCAATTTCACCATGT11.098901098901099No Hit
AACTCGATGTTCCCGGCCACCGTGCGGGAGGTCAGGAGGTTGAACTGCTG11.098901098901099No Hit
ACACCACACTGGACTTCAAGAACTCACACTCGGGGGGAGACCCAGATACC11.098901098901099No Hit
CCCCTAGCTTGGCACACACCAAGGAGTGCCAGAACTGGCTGGATGTGATC11.098901098901099No Hit
GGTGAACTCACTGGAACGGGGATGCTTGCATGTGTAATCGATAAACCCCG11.098901098901099No Hit
GGCTTGCAGGACCTGAAGCAACAGGTGGAGGGGACCGCCCAGGAAGCCGT11.098901098901099No Hit
AGTCGGACCCGTCGTTGAGCGCCGCGAAGAACTTCGCCTGCGCCGCCGGC11.098901098901099No Hit
GATTCAATTACTTCCCACCAGGTCCCTCCCACAACATGTGGGCATTATGG11.098901098901099No Hit
GAGATACCACAGTCTGAAAGAGAAGATTCAGTGGGTTCAGATTCTGACTT11.098901098901099No Hit
GAACGGTCGCGGTTGGTGGTGATCGCGGTGGACAACAGCGATGTCGCGCT11.098901098901099No Hit
ACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTTTTGGTTTTGCTA11.098901098901099No Hit
TGTAAGTTTGTGGATAGGGTATTGCAGCATCAGTAGGTAATGAGATTGGG11.098901098901099No Hit
GGTATAGAACAGTGATGGATCAACAGGGAGCAAGAGATGAAGACATTTGC11.098901098901099No Hit
ACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTCAAA11.098901098901099No Hit
GTGTTCGGGGTGGTATGGCAGTAGACAAGTAACAGCATCTTAATTAGTTC11.098901098901099No Hit
AGCCCACCGTCTGCGCGAGCGGCGCCGTGCCGCCGGGCGCAGCCGCCATG11.098901098901099No Hit
GGTGAATTCTGCTTCACAATGATAGGAAGAGCCGACATCGAAGGATCAAA11.098901098901099No Hit
GTTGAAGTTTTTTTAATAAGTAGGGTATTGAGTTGAAGGAGGAGTAATGC11.098901098901099No Hit
GAGTCACCAAAGCCGCCGGCGCCCGCCCCCCGGCCGGGGCCGGAGAGGGG11.098901098901099No Hit
AATATCTTCACATAAAAACTACACAGAAGCATTCTGAGAAGCTTCTTTGT11.098901098901099No Hit

[OK]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)