FastQCFastQC Report
Thu 1 Sep 2022
EGAF00003674096

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00003674096
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences74
Sequences flagged as poor quality0
Sequence length146
%GC47

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[FAIL]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[FAIL]Overrepresented sequences

SequenceCountPercentagePossible Source
ATTCATATGCGGATCTGAGTTATCACTGAAATGGTGAGGACATTTCCTTT45.405405405405405No Hit
CCTGTAATCCCAGCACTTTGGGAGACCAAGTCAGGCAATCATCTGAAGTC34.054054054054054No Hit
GCGTTACGCCGGTGCCGCCGAGATCGAGGCGGGTCGCGATGGGGCCGGAA34.054054054054054No Hit
GCTTGAAAGGGGTGGTCGAGGCACCTGTGTTGTGGAAGAAAAATCACAAA22.7027027027027026No Hit
CACATACACACACACACAAAAATGAAGATTTTCTTGACCAGTTGTACTTC22.7027027027027026No Hit
TCGCCGAGGTGCTGCTGAACCTGGGCTACAGGATTTCCGGTTCCGACCTG22.7027027027027026No Hit
ACCTTTAGATTTATATATACACTGACACGGAAGGATGTTCATAAAAGCCA22.7027027027027026No Hit
GACTTTTTGGAGATGTGGTTGATTCAGGACTGAGGCAGGGAAAATACAAG22.7027027027027026No Hit
TACAATCTCTGTAGAACTATGTGTCACACAAGGATTGTTTTGAGACAATC22.7027027027027026No Hit
GGTCCGTTGAACCGACGAGATGCGCCGGGACAGTTCCCGCCGCTGCTCCT22.7027027027027026No Hit
TTGAAAATTCCACGCCACTGCAAGACTTTGTTTTCACATCCAGTTTCACC22.7027027027027026No Hit
GTCTATGGGCCTTCTCATCTTTGATACTCATGTCTTCCCCAGCACCTGGG22.7027027027027026No Hit
GGAGGGAGAGCTGCAGAGTGTCCTGCCTGCCTTGGCTGGAGGGACACCTC11.3513513513513513No Hit
GCCTACAGGTATGCGTGATTGTGTGTGTGTGCATGGGTGTACAGCCACGT11.3513513513513513No Hit
GTTACTCAGTGCATATGTAAGTTATGTTTACACTATCTTGTAGTCTATAA11.3513513513513513No Hit
GGATTGGAACCAACCCAAGTGGAATAGAATGGAATGGAATGGAATGGAAT11.3513513513513513No Hit
GTATGGTAGTGGCCTTCAGTGATGTCTTCAGCTAACTGACAGGGAAACAG11.3513513513513513No Hit
CAGCTGCAGGAGAACTTCTCCGCGAACATGCTCGCCCTGGTTGACGGAGT11.3513513513513513No Hit
GTAGTACAAAGTATTTACTTCCAGTCTCTCCTCCAACTCTGAATCCAACA11.3513513513513513No Hit
GTTTGCTATTCCAAGGCTTCTATTTTCATTATTAGACTTTGGTTTATCCA11.3513513513513513No Hit
TATTGAGAGTTTTTAGCATGAAGGGCTGTTGCATTGTGCCGAAGGCCTTT11.3513513513513513No Hit
GCATGTCTACCAATCTAATCTTTCTCATGTTTTATTTGATTACATCATTC11.3513513513513513No Hit
GTTCGTTTGTTTGCCTTTTTTATTTTTTGAGATGGAATCTAGCTCTGTCT11.3513513513513513No Hit
GTCACCCAGGCTGGAATGCAGTAGTGCGATCTCGGCTCACTGGAACCTCC11.3513513513513513No Hit
GTATTAAAACCATGCCTTCTGAATCACAAGGCCATCCACGTGTACAAAGG11.3513513513513513No Hit
CTTCCAGCACCATCAGGCTTTTTTCCAGCAGGATGATATCAGCCGCTTCA11.3513513513513513No Hit
ATCCTTGTCAGTCGCCTTTTTACCGGCAACTTCATCGGCGCGGTTTTCGC11.3513513513513513No Hit
GGGCCTCTCAAAGTGCTGAGATTACAGGTGTGAGCCACTGCACCCGGCCA11.3513513513513513No Hit
TCCGATTCCTGAACAGTGTCATTCGAATCAGAATGTCAGAGCTGAGTCTG11.3513513513513513No Hit
TGTTTAGTGCTTCCTTCAGGAGCTCTTTTAGGGCAGGCCTGGTGGTGACA11.3513513513513513No Hit
GGCCTAAAGAATCCAAGGGACTAAAAGCTTCAGAGACCACCTGCTATGCT11.3513513513513513No Hit
CATATGGAACCAGCCTAAATGCCCATTAACCAATGAGTGGATACAGAAAA11.3513513513513513No Hit
GTTTCCAACGAAACCTTCAAAGCTATCCGAATATCCACCTGCAGATTCTA11.3513513513513513No Hit
GAATGGAATCATGATCGAATGGAATCAAATGGAATCTTCGAACGCACTCG11.3513513513513513No Hit
GACGATCCGGTCCGAATTGCGTCGATTTCCAAACTGGTCACGGCCATTGC11.3513513513513513No Hit
GATAGGAATGCATCTACAGGGAGATGCAACAATAATTGAACTACACTGGA11.3513513513513513No Hit
CAGCATGACGGCCCGGGTGCCGATGCGGTCGNNNNCNCAGCCGGCCAGCA11.3513513513513513No Hit
CTCCAGCCTGGGTGACAGAGCGAGACTCTGTCTCAAAAAAAAAAAAAAAA11.3513513513513513No Hit
AACAGGCACATGCCTTTCCTCTCCTGACTTCCCTCCACATCCCCGAGCTT11.3513513513513513No Hit
TTTTCCAACGTAGGCCTGAAAGCGATCAAAATGTCCACTTCCATATACTA11.3513513513513513No Hit
GTTTCAAACATGCTCTCTGAAAGGGAATGTTCAGTTCTGTGACGTGAATG11.3513513513513513No Hit
AAAGTAAGGTAATATTCAGAGACAGTTGTTTTGCTCAGAAGCTACAAATA11.3513513513513513No Hit
CAGCATGACGGCCCGGGTGCCGATGCGGTCGCTCGCCCAGCCGGCCAGCA11.3513513513513513No Hit
ACTCACATCCTGCTGATTGGTAGAGCCCAGGGGTCTGTTTTGACAGGGCA11.3513513513513513No Hit
GATTCCTGGAAATGTACAACCTTCCAAGATGGAACCAGAAAGAAACTGAA11.3513513513513513No Hit
GCGCGGCAGCATCGCGCACATCCTCGCGCGGCACGTGGAAGGCGCCTCGC11.3513513513513513No Hit
CCCTTATATAGGACTCCCTAGAACACATATGTATGGGGGAAACTCTAATG11.3513513513513513No Hit
TAAAGTGTTGGAGCCGTGCTTATCCACAAAATGAGAGGTGGCCCTGAGGC11.3513513513513513No Hit
GAACCAGCAGACCTAATAGACATCTACAGAACTCTCCACCCCAAATCGAC11.3513513513513513No Hit
ATTATTTTGCATGTGGATATCCATGTTTCCAAGCATCATTTAATGAAAAA11.3513513513513513No Hit
AACATTACAATAGCTGATAAGCTTTAAAAAATGGCAAAAAAAACCCTCAG11.3513513513513513No Hit
CTACAGGCCCATTGGCAAAGCAGATTCTCTCAGGATGAAAGAGAAACTTA11.3513513513513513No Hit
ATCTTATACAGCACTTACTATGTACCAGGCACTCTTCTGAGTGCTTTACA11.3513513513513513No Hit
GCTTTGAAGTATCAACTGAGATATTTCCTGCTTCTTAACAAGATTTCTTA11.3513513513513513No Hit
TCCTGAAGGTTCGGATAGGCCTGGATGAGCTGGGCCGTCAGGCGATCCAT11.3513513513513513No Hit
CCCAGGAGGTGGAGGAAGTTGCAGTGAGCCGAGATCACGCCGCTGCACTC11.3513513513513513No Hit
CAGTCGATGGTCAGGGACTGTGCCCAACCAGGGCCTGGCTGTGCCGTGGG11.3513513513513513No Hit
GGCTATTGGAAATCCAAGGAAAGATTTCTGGGCAGATGGGTAGAAATTTT11.3513513513513513No Hit

[WARN]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)