FastQCFastQC Report
Thu 1 Sep 2022
EGAF00003674097

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00003674097
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences95
Sequences flagged as poor quality0
Sequence length146
%GC47

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[FAIL]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[FAIL]Overrepresented sequences

SequenceCountPercentagePossible Source
CTGCTCGCGCATGCGCGCTCGCTGCTGGAGGCCAGCCCCCTGGCCGAGAG44.2105263157894735No Hit
CGCCTGGCGCGTGTTCGGTATCCCACACCTTCGGGTCGGCCAGCACGCTG33.1578947368421053No Hit
GAAAGAGTTCCATTCCTTTAAAAGACATACCTGGGAATATCTTTGCCGGA22.1052631578947367No Hit
GGTCCTTCACATCCCTTGGAAGTTGGATTCCTAGGTATTTTATTCTCTTT22.1052631578947367No Hit
CCCAGGTACGCGGCGATTGAGGCTTTCCCCCGGGGCTTCGCGCGCTTCGG22.1052631578947367No Hit
GGAAAGAAAATACTCATGATAGATGTAGCTGCACTTTTGTCAGATCCCTG22.1052631578947367No Hit
GCTTTATTGTAAGACTTTCTAGTAGAAAACAGACATTCAATTATGCTGTC22.1052631578947367No Hit
GAAATAATAAAGATGAGAGCTGAAGTAAATAAAATGGAAACAAAAAAATT22.1052631578947367No Hit
GTCTATAGTAGTTTCTGCTTTCTTTAGTGAACAATAACCAGGAGTGGTTT22.1052631578947367No Hit
GAGCTCTTTTTATCAAATCCTACAGCAGGGTTATGGAGAACAATCATGGA22.1052631578947367No Hit
CGCGGGTACCAGGAGGAATACAGAGCTTCCCTACAAAGATCATAGCTGTC22.1052631578947367No Hit
GGGTAAAACTAACCTGTCTCACGACGGTCTAAACCCAGCTCACGTTCCCT22.1052631578947367No Hit
CTCGTTCATCCATTCATGCGCGTCACTAATTAGATGACGAGGCATTTGGC22.1052631578947367No Hit
GGTCTGCGCTCTCAGCGTGGGGCGGTTCCTTGCCTAGCATCTGTTGAGTG22.1052631578947367No Hit
ACTTAGAGGCGTTCAGTCATAATCCCACAGATGGTAGCTTCGCCCCATTG22.1052631578947367No Hit
ATTCTCACTGTGATATATAAACTCAGACCCAAACATTAATCAGTTCTTCA22.1052631578947367No Hit
GCTGAGACGGGGTACAACGAACCAGACGTGTTTGCGGTTTGCCGTTTAGT22.1052631578947367No Hit
GCCGCAGATGGCCGTGCCGGTGGCCAAGTACGCGCTCGAGAAAAACGTGA22.1052631578947367No Hit
GGCCTATATTACGGATCATTTCTCTACTCAGAAACCTGAAACATCGGCAT22.1052631578947367No Hit
CGCAGATGCTGCGCGGCGCCTGTTTCCTCGATGAAGCCCATGCCGCCATG11.0526315789473684No Hit
TGTCTGTCTGAATACATTACACAAGTAGTCTGTGACCTTGATCCCTGCAA11.0526315789473684No Hit
TAGCCAGAGGCTAGCCGTGATGGGCTCTGTGGGCCCCGGACTTCATCCAA11.0526315789473684No Hit
CCTTGCCGGCCATACTAATAAATGCTCCCAACATTGGAAAGCGAGGGATC11.0526315789473684No Hit
TATAAAAGCAGAGGCTTTAGGCCAGATGACATTTGAGGACCCTTCTAGCT11.0526315789473684No Hit
GTTTGAAACACTCTTTCTGTAGTATCTGCAAACGGACATTTCAAACGCTT11.0526315789473684No Hit
ATTCCATTCCATTACAATCGGGTTCATTCCATTCCATTCCATTCCAATCC11.0526315789473684No Hit
TCAGTAGACTGAGCATAGGTAAAGAAAGAATCAGCAACCTTAAAGCTGTC11.0526315789473684No Hit
CTCCCAGGCTCAAGTGATTCTCTTGCCTCAGCCTCCCGAGTAGCTGAGAC11.0526315789473684No Hit
GAGACAGGGTCTCACCATGTTAGCCAGGCTGGTCTCGAACTCCTGTGACC11.0526315789473684No Hit
CTTGGAAAGGCTGCCCTCGCCGGTATCGTGATAGAAGCCGCCCCGCTTGG11.0526315789473684No Hit
CAGGGGACCTGTCCTAGTCTAGAGAGTAAGGGAAGCCCCCTCCAAGGACT11.0526315789473684No Hit
GTCTTCTTTCCCCGCTGATTCCGCCAAGCCCGTTCCCTTGGCTGTGGTTT11.0526315789473684No Hit
CCCCCACAGAACGGCTTAGCCGGGGAGATCCGCCGGCGAAATTGCAAAAA11.0526315789473684No Hit
GATTCTACTCGATTCCATTCAATGATTATTCAATTCTATTCCGTTTGATG11.0526315789473684No Hit
CTTCACGACCGACGCGCTCATCCAGTGCCTCGAGCAGGACGCCGAGCTGG11.0526315789473684No Hit
GATGTGTAGACTGTACTCCCCTTAATATAATTTAACATCAGCAAAAGTCC11.0526315789473684No Hit
GTGCAATGGCACGATCTCAGCTCACTGCAACCTCCACCTTCTGGGTTCAA11.0526315789473684No Hit
GATTGTCTCTAACTGGAAAACCAAGAAACATTACTATGCTAGAACTGTTT11.0526315789473684No Hit
TACCTATACAAATCATGATTTCTTGGGTAATTATTGAAAGTAAAATTTGG11.0526315789473684No Hit
CCACCTGCCTCAGCCTCCCAAAGTGCTGGGATTACAGGTGTGAGCCACCA11.0526315789473684No Hit
ATTATATTCTATCGCGATGGAAAATCATGAAGGAAAAAAAGCATTTCTTT11.0526315789473684No Hit
GTCTCAGGAGTGAAGCAGCAGAGTTCTTCTTGAGATGAGTGCACCCTGAT11.0526315789473684No Hit
GACCTGGATATGGGTAATGACTTTCTTACTGTGATTAAAAATAAAGATGT11.0526315789473684No Hit
GGAAAGAAAATACTCATGATAGATGTAGCTGCACTTTTGTCAGATCCCAG11.0526315789473684No Hit
ACAATGAATTGATTGCAGTTGGAAAAGGCAGCTCACTGAAGCGGCTCCCT11.0526315789473684No Hit
GTTGACGCTCGTTGGCTCATCGCGCCTGGTTGTCGGGCACTTGAAGCGTT11.0526315789473684No Hit
ATATTTGTACTTGCCCACTTTTCCTCTTGTGGGCCTGTTCCTAGAATCCA11.0526315789473684No Hit
GTCTTGACCTCCTGACCTCAGGTGATCCGCCCGCCTTGGCCTTCTAAAGT11.0526315789473684No Hit
ATCCACCTCCTAGAAGATAAAGCATATCAGAAGACAGTGAACTGGAAAGC11.0526315789473684No Hit
GTGAGCATTCGGCTCCAAGCGCCGAAGATACTGATGATAAGACGATTTTT11.0526315789473684No Hit
GGTGCTGTGGCTCACGCCTGTATCCCAGCACTTTGGGAGGCCGAGGCGGG11.0526315789473684No Hit
TGCCACCACAGCCTTACTCAGTCTCTCCTCTAACTGCTGTCAGGAAACGT11.0526315789473684No Hit
GTTGTGTGTTCAGCCTAGATTTTACTTTTGCAAGATAGTCAGCTGCTGAT11.0526315789473684No Hit
GGGCTAACTTCATATGTAGGGGTAATATAATAGAACTCCACCTTTTTCTA11.0526315789473684No Hit
GTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGT11.0526315789473684No Hit
CTTCTAGGTACATCTGAATTGGAGACAAGATTTTTTGTAGACCTGTGATG11.0526315789473684No Hit
GTCCAGATCGTCGAGCACACGGCAGCATCCGTCATAAAACCTGTGCGCTG11.0526315789473684No Hit
GTCCTAAGGCGAGCTCAGGGAGGACAGAAACCTCCCGTGGAGCAGAAGGG11.0526315789473684No Hit
ACCAGAAACCATAAGTGAGAGACTCTTCATAATTCTATAACTAGTTAAGT11.0526315789473684No Hit
GAAAACCTGCTCTAAAGAAATAAAAATTATTAAGGCAAATTTTTATTAAG11.0526315789473684No Hit
CAGTAGCACTGGCTCCCCAAAGTACTTACTGCCTGGGGAATCTAAAAGGC11.0526315789473684No Hit
ACATTAGCTAGGGTAGATTAAAATAGGTGCAGAAAAGTTCAAACATGATG11.0526315789473684No Hit
GTTGGGAGTCAGACTTTGTTATCAACCCACAATTAGTCCATCAATGTAGG11.0526315789473684No Hit
GCTTAGGATTGTCTTGGCTATGTGGGCTCTTTTTTGGTTCCATATGAAAT11.0526315789473684No Hit
GTGCTGGGAAAACTGGCTAGCCATATGTAGAAAGCTGAAACTGGATCCCT11.0526315789473684No Hit
TTTAAATCCCACTGCTTTCTGGCTTCCATGGTTTCTGATGAGAAAGCAGC11.0526315789473684No Hit
GTTCCTGAGCAACCAGATCGCGGAGCTGACGCCCGATGCGATGATCCTGT11.0526315789473684No Hit
TAGCAACACGACGGGTTCTTACAATGCGTTTACGGGCTATCAGACGGGTT11.0526315789473684No Hit
CCCAAAGATCTCCTTGGCATCGTGGTAAAACTTGTGCAGTTCATAGGAAG11.0526315789473684No Hit
GTTCTGGAACGGCAGTGTCACTGCACTTGTGTGATGTATCTTGCAGGCAC11.0526315789473684No Hit
GTCCCTGAGTCACTGGGGTGACGCCTTGCTCTGGCCCTCTGTCCCCAGCT11.0526315789473684No Hit
GAAGTAAGAAGATGGGACAGAAGCCTTTATAGTCATGCCCCTTCCCCTGC11.0526315789473684No Hit
CACTGTATTTCAGTTAATTCCATCTATTTAGAAGGTTAAGATTGTAGTTC11.0526315789473684No Hit

[WARN]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)