FastQCFastQC Report
Thu 1 Sep 2022
EGAF00003674098

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00003674098
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences95
Sequences flagged as poor quality0
Sequence length146
%GC47

[OK]Per base sequence quality

Per base quality graph

[FAIL]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[FAIL]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[FAIL]Overrepresented sequences

SequenceCountPercentagePossible Source
CCCCGGTGCAGGGTGCGCGCAGGGAAACGGCTTCAGGTCGACCAGATGCG44.2105263157894735No Hit
GACGATCCGGTCCGAATTGCGTCGATTTCCAAACTGGTCACGGCCATTGC33.1578947368421053No Hit
GTTCTGTATTTTATGGTTTCCAGCTACTTATTTTTAGGTTGGCCCCTGGG33.1578947368421053No Hit
GCTACTGAGTAGCCTCCTCAGATTCATTGAACTAGGTCTGTCCCAATGTA22.1052631578947367No Hit
ATACAAAATCAATGTACAAAAATCACAAGCATTCTTATACACCAACAAAA22.1052631578947367No Hit
GAGAGAAGTCCTGAACCCATAATTTCCTTTCTATAAACCTTCTAGTGTAG22.1052631578947367No Hit
AGGTAGGACGGGAAGGTGGAGGGGTGGGTGCGCAAAGTCCAGAACGTGCA22.1052631578947367No Hit
GATGAAACCGATATCGCCGATACGGTTGTATAGGATTGCTTGAATGGCTG22.1052631578947367No Hit
GTACGAATACAGACCGTGAAAGCGGGGCCTCACGATCCTTCTGACCTTTT22.1052631578947367No Hit
GTTGTAGGCCTTGATCATTGCGTAGGTGGCCGGTCCCCCAGGACCGAAGA22.1052631578947367No Hit
GTATAGAGTTGCTCATAGTAGTCACTAATGATCCTTTGAATTTCTGCAGT22.1052631578947367No Hit
GTCAGACTCTGCAAGGTCTTCAGAAAGGCACCTCATGTATAAAAGGCAAT22.1052631578947367No Hit
GAAAAGTTACCACAGGGATAACTGGCTTGTGGCGGCCAAGCGTTCATAGC22.1052631578947367No Hit
GAAATTATATTAATAGTCCTCTATCAATTGAGAAACCTTTTTTTATGAGT22.1052631578947367No Hit
AAGCAGGGCGGCTGGGCGCTGGAACTGCAGGGCCTGTACCTGTTCGGCGC22.1052631578947367No Hit
CACCTTCACTGTGAGCGACAGGCGAAAGCGCCACCAGTAACAACGGAAGA22.1052631578947367No Hit
CTTAGAAACCTTGTCTTTAACCCTTCAGTAACCACACCAAGAGACTTTTC22.1052631578947367No Hit
GTTCCGCGCGGCGCCTCGCCTCGGCCGGCGCCTAGCAGCCGACTTAGAAC22.1052631578947367No Hit
CAGCATACACACCTTATCCTATGTCACAGATGGCAAATCAATTTGCAAGA22.1052631578947367No Hit
CTGCTAAATTTTGTATTTTTAGTAGAGACGGGGTTTCACTGTGTTGGCCA11.0526315789473684No Hit
GATTACTTGAGGCCAGGCGCAGTGGCCCATGCCTATAATCCCAGTACTTT11.0526315789473684No Hit
ATTCTGAAGGGTTTCGCCAACGGGTACCGATCGGTGAATAAAGCGGATTT11.0526315789473684No Hit
GGGTTGCACAACACATGGAGCCTCCTGGAGTGTGGCACACTCTGGACAGG11.0526315789473684No Hit
GCTGTTATCAAACTCCTGATCCCAAGTAATCTGTCCCCCTCGGCCTCCCA11.0526315789473684No Hit
GAAATAGTTCAGCAAGTTTTGTTATCACCAGACTTGAGAAATGAGAGGAG11.0526315789473684No Hit
AGTCATATAACATGATAGGTGCTCAATGATTCAACATGTATCTCTTAGAT11.0526315789473684No Hit
GTAAGAACCCGTCGTGTTAGAGTAACCCGCATAGTTGCCCATAAACGAAT11.0526315789473684No Hit
AACGCTTGGTGAATTCTGCTTCACAATGATAGGAAGAGCCGACATCGAAG11.0526315789473684No Hit
ACTATGAGCATGTCACGATGTTACAAGAACTATTCCGGGAGTTTGCCCGA11.0526315789473684No Hit
GTCTCAAAAAAAAAAAGTAAATGAAGTAAGGACATTTCAAAAGCATCGAG11.0526315789473684No Hit
AATGTATAACAGTTATAGGGAAAACTATGGCGCTTCGCGTTGAGCCGATG11.0526315789473684No Hit
CTGCTGTACACTGGCTGTCCACAAGGCCACACCTCACAAATCCGGGTTTC11.0526315789473684No Hit
GAAAGAAATCCTGGCTGGAGGTGGAAGGAAATCAGAGGGGTTGTGGGTCA11.0526315789473684No Hit
GGATACAACTCGGAATATATTTGGGCTCATTTCCCGATTCAAATGGTGGC11.0526315789473684No Hit
ATAGCAATACCTAGGGAAACTATGCTTAATTGATTCTTAATAATGTCAAA11.0526315789473684No Hit
CAGCCAATGTCATACTGAATGGGCAAAAACTGGAAGCATTCCCTTTGAAA11.0526315789473684No Hit
CACCAGCCACATAGACAATCAAGCCAGAAACCAAGGAATCACCCATGTGC11.0526315789473684No Hit
GGTTTTAGCTGCCGCGTCAACGTGCGCCGTATCTGCGAGCCTTGTTCGAG11.0526315789473684No Hit
ATTGTTTCTAGTAATTATTGAGCATGAAGCTTCCATCATATGCCTTACTT11.0526315789473684No Hit
AGGCAGCTGATCACCTGAGGTCAGGAGTTCCAGACCAGCTTGGCCAACAT11.0526315789473684No Hit
ATGGTGGGGGGCGCGGATTGCAGCCGGCCTTATTCCACCTCGGTGCTCAA11.0526315789473684No Hit
GAATGGAATGGATTGGAATGGAATGGAATCGAATGGAATCAACCTGAGTG11.0526315789473684No Hit
CCTCAAGATAATCATTTCGATTTTCGTTTTTTTCCATTTGCTCATTACGC11.0526315789473684No Hit
CCATTTACTCTGTCCTTCCTGCTGCTTCTGAAGGTTTTCTCTGTTTGTGG11.0526315789473684No Hit
GACGCGCGCCGTGGCATACGTCACTGCGGCGGCTCTCGACAACGCCAAGG11.0526315789473684No Hit
GTTTTCATTTTTTACAATCCTTGCCAATTTTTTTGCAGAATATTTATCAA11.0526315789473684No Hit
ACCGGGTAGGTCCAGATCGGCCAGCCGGAGTTGTAGAGGTTGAAGACGGG11.0526315789473684No Hit
CTTTAAGGTTGCTGATTATATCTTTACCTATGCTCAGTCTACTGACTGTC11.0526315789473684No Hit
AACAGGCACATGCCTTTCCTCTCCTGACTTCCCTCCACATCCCCGAGCTT11.0526315789473684No Hit
AACATTTACTGCCGATTCACCTCATCTGCATTTCTTTAATTGCCGTGGAT11.0526315789473684No Hit
GTCGAGATATTCGTGCAGCCCCTTGCCGGACAACCGGTGCAGCTTGGCGC11.0526315789473684No Hit
TCTGAGCTCTTGTTGGTGTATGTTAGTGTTCCCAAAATGAAGACTTAGAT11.0526315789473684No Hit
GTCTTTATCCTCACCACTGGTGACTTTCTTCTCTCCCTTCCTATTTGTGG11.0526315789473684No Hit
GCATAGAAGGAACTTAGATTTATTAACTAGATTTCAGATCCTTAAAACTT11.0526315789473684No Hit
TTTCAGTTTTAAATGTAACCTGGAGGGTGCAGATGAAAAATGAAATCTGT11.0526315789473684No Hit
CGCCACCAGCATGGATCCTGAAATACTCATCATCGACGAAGCGCTCAACA11.0526315789473684No Hit
GAATGCAAACATCACAGAGAAGTTTCTGAGAATGCTTCTGTCTTGATTTT11.0526315789473684No Hit
TCCCTGGCCCGCCCACCTCCACACCCTCGCACCTTCCACACGGGCCTCAT11.0526315789473684No Hit
CACACACACACACACACACACACACACACACACACACACACACACACACA11.0526315789473684No Hit
ATATTTATGTGATTCACAGTCACTTCTACATATTGTTCAGAATACTGCTC11.0526315789473684No Hit
CATTGAATGGACTCGAATAGAATCATCCTCGAATGGAATCTAATGAAATC11.0526315789473684No Hit
GTCACCCAGGCTGGAGTGCAGTGGCGCGATGTGCAATCTCAGCTAACTGC11.0526315789473684No Hit
CCTTTTCCCACTTTTTGATGGGGGTGTTTTATTCTTGTAAATTTAAATTC11.0526315789473684No Hit
GAAAAAATATTGGAAACTGTCCAATCTGTGTGATGAATACATGGTTATTC11.0526315789473684No Hit
TAACAACAGCATTCAGTTAAAGATTAAATTATTTTCAGAATAAAAATTTT11.0526315789473684No Hit
GTCTTGGATAAGGTAACTGAGACTCAGGTTCAGCAACGTACTGAAGTTCA11.0526315789473684No Hit
CCTAAGAATAATTGGTATTCCTGAGCAAGAAGATAAATCTAAAAGTTTGA11.0526315789473684No Hit
GACCAGGGGAATCCGACTGTTTAATTAAAACAAAGCATCGCGAAGGCCCG11.0526315789473684No Hit
GTGTTCAATTTTGCCATTCATTCTAGCTCCAAGATTAGGAGTCCCTTCGA11.0526315789473684No Hit
CAGTCGATGGTCAGGGACTGTGCCCAACCAGGGCCTGGCTGTGCCGTGGG11.0526315789473684No Hit
GCTATGCGAGAGGATGAGGCTAGAGAATCACTTGAGTCTGCGAAGCAGAG11.0526315789473684No Hit
GCTGTAATCTGGAACGTCCGCCCGTGGCGGCGCGGTGGTGGCGTGTGTGC11.0526315789473684No Hit

[WARN]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)