FastQCFastQC Report
Thu 1 Sep 2022
EGAF00003674105

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00003674105
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences59
Sequences flagged as poor quality0
Sequence length146
%GC48

[OK]Per base sequence quality

Per base quality graph

[FAIL]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[FAIL]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[FAIL]Overrepresented sequences

SequenceCountPercentagePossible Source
GCGCGACAGCTCGGCCTGGATCGCCCCGTCCGCCACGTTGAAGCAGGTGC23.389830508474576No Hit
TACTTACTCTCTACCCAAAAAGAAAAAGGTTCTAGTCCCATCAGATACTG23.389830508474576No Hit
ATTCCATTCGATTGCACTCGTGTTGATTCCATTACTTTCAATTCCATTCG23.389830508474576No Hit
GTTCTCTTCTTGTCATTTGTCATTTTGCATCTGATTATTTTTAAGAATTT23.389830508474576No Hit
GTGTTTGAGAAGCTTGGAAATTTCAGTATACATTATCATCTGAGGCTCGG23.389830508474576No Hit
CCCCCAAATAGTGAATCCTTCTCATTCTTCCTTTTTTTCCATCTCTCCCA23.389830508474576No Hit
GGAAATATACCAGCCGTATGTATTGAGCTAGTGTACCGCTTAACAAGCAT23.389830508474576No Hit
GTTGCACACTGGGGTTCTAATCTGCATCACGCCAGCAGTGGGAACGTTTC11.694915254237288No Hit
GGGGCATTCGTATTGCGCCGCTAGAGGTGAAATTCTTGGACCGGCGCAAG11.694915254237288No Hit
GGTGGGTTGCTAAGTCTGATATCTTCCAAAAGGAAGGTGCACTTTTTTGA11.694915254237288No Hit
CTCACAGCCAATATCATACTGAATGGGCAAAAACTGGAAGCTTTCCCTTT11.694915254237288No Hit
GAATGTGATGTTCCCCTTCCTGTGTCCATGTGTTCTCATTGTTCAATTCC11.694915254237288No Hit
CGCTGCAGCCGGGCGAGGTCATCTACGTGCAGAGCGGCCATGCCGTCTCT11.694915254237288No Hit
GGGGTGAATACAAAACCACATATGGTTTACAAGCTGACTGTATCGTCCTT11.694915254237288No Hit
GCTGAGAAGGCTGCACCAAAGAGAGGGGACCTGGGTTGGACCTGGGTGCA11.694915254237288No Hit
CTTCCTTACCAGTAAAATTTGACACCTCAAAGAATGAGTAGTATACTTTG11.694915254237288No Hit
GCCAGCAGCAGCGCCGGCGACAGCGCGATGCCGGCCAGCATCCCGAGCGC11.694915254237288No Hit
ACCGTATGCAGAACGTGCTGCTGAGCTTCCGCGTGCGCAACCTGACCGAC11.694915254237288No Hit
ATTGCATGCTACAGAGAAATATTTCGTGAAAGGAAGAGTCAATCAATGTA11.694915254237288No Hit
GTCTCATGCTTACCACCTTGTATTTGCTGTTCCCTCTGCCTGGAACGTTC11.694915254237288No Hit
GGCATGATCTCGGCTCACTGCAACCTCTGCCTCCTGGGTTCAACCAATTC11.694915254237288No Hit
TACCTGAGGCAGAGGATGCTCACGGCCATTTTGGGGCCCTTCCATCCAGT11.694915254237288No Hit
CCCACACTGGAGTGTGGTGGCACGATCTCGACTCACTAGAGATACAGAAT11.694915254237288No Hit
CTTCTCAGGCAACCTCTCTCCGTGTGGGAACAGAAAGGCTCATAGAATCT11.694915254237288No Hit
ATCTTGTCCTGTTGCACAGGGTGGGGTACAATGGCGCCATCTTTGCTCAC11.694915254237288No Hit
AAATGATACTCTTTAGATGGAAGCGTAATCCTCACGCCATGTTTGATCTT11.694915254237288No Hit
TACCTGAGGCAGAGGATGCTCACGGCCATTTTGGGGCCCTTCCATCCATT11.694915254237288No Hit
CTTTTGAATGAGCACCATGGGATTGTAGCTGGCGGGCACGCAGCAGGGCG11.694915254237288No Hit
CTCTTATACACATCTCCGAGCCCACGAGACCCTGGCTATTGTATCGCGTG11.694915254237288No Hit
GTTAAGCCCACGCTGGGGTCGCATCACATCCCGCAAAGCCACGTGCTCTG11.694915254237288No Hit
CCACCACACCTGGCTCTGGCTTATTTTACTTAGCATAAGGTACTCCAGGC11.694915254237288No Hit
ATTCGATTCTATGCGATGATTCCATTCCTTTCCATTAGAAGATGATTCCA11.694915254237288No Hit
CATTCAATGATCCCATTCCAGTCAATTAGATGATTCCATCTGATTCCATT11.694915254237288No Hit
ACCAATGCCAGCGCCAGCAATAAAAACAGAAAACCGGGCCAGGCATTGGC11.694915254237288No Hit
GGTCTCTTCTTGTCATTTGTCATTTTGCATCTGATTATTTTTAAGAATTT11.694915254237288No Hit
AGCCGAGTTTCTCGAAGAACTAAACGGCGGCGCTTTTGCCAGCCAAATCG11.694915254237288No Hit
TCACCGGCCACGACGGCAAAGCCCTTGCCCTGTTCGCCGGCGCGCGCGGC11.694915254237288No Hit
TTCTGAAGTTGTTAATAACTGTATTTGAAGATTAGCAGCTATATTGTGAT11.694915254237288No Hit
GTTCGTACATCGTCGCGTCCGGATCGAGACGCGGGTCGGCCGAGTAGACG11.694915254237288No Hit
CATTCAATGATCCCATTCCAGTCCATTCGAGGATTCCATCTGATTCCATT11.694915254237288No Hit
TCCAGCTCCAGCTCACCGGCAGCTACGCCGCGCGCGAGTACTGCGTGCGC11.694915254237288No Hit
GAATGGAATCAAAGGGAACGAAATCGAATTGAATGGACTTGAATGGAATT11.694915254237288No Hit
ATTCCATTCCATTCCCCTGTACTCGGGTTGATTCCATTCCATTGCATTCC11.694915254237288No Hit
GTTCCTAGACAGGGCAGTTCCAGACGAACATCCTGTTTGCGCCTCTGAGC11.694915254237288No Hit
AGCCAACTCTTGATCCTTCTTTAGACTAAGTGCTCCTTTCAAAGTCCAAA11.694915254237288No Hit
GTATGCACACGGGCAGCACGACGCTGCCCGATTTTTTTGCAGGGATGAGC11.694915254237288No Hit
TCTCTCTCCATACCGCTTCTAAACTTCTTAAAACTCCCCAACTCTGGTGC11.694915254237288No Hit
TCTCTGGGATGTGTGTGTGCACGCACATGACTGTGTGCCCAGAAACAGCC11.694915254237288No Hit
CGATTCCACTCCATTCCATTCCATTGCATTCCATTCTATTCCATTCCATT11.694915254237288No Hit
GGGTAAGGGCCAGGGCCTCCGAGAGGAGTAAAAGGAGGGTTCCATCTACC11.694915254237288No Hit
GTTTTAGGGTGTCTACCTTTGTTATCTATGAGTGCATAACAAATTAGCCA11.694915254237288No Hit
GGATGACTTGAAGACACCGCGTCTGAGATCGTTCAGCACCACCGCAGGTG11.694915254237288No Hit

[OK]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)