FastQCFastQC Report
Thu 1 Sep 2022
EGAF00003674106

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00003674106
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences59
Sequences flagged as poor quality0
Sequence length146
%GC48

[OK]Per base sequence quality

Per base quality graph

[FAIL]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[FAIL]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[FAIL]Overrepresented sequences

SequenceCountPercentagePossible Source
CACATATACATGTACTTAATTATACACACACACACACACACACAAGATCA35.084745762711865No Hit
GGGTCTTTCCATGCTGTTCTCGTGATAGTGAACAAATCTCATGAGATCTG23.389830508474576No Hit
GAATCATCGAATAAAATTGATTGAAATCATCATCAAATGGAATCGAATGG23.389830508474576No Hit
GATGAGATTGCAGGTGGCTTCCTATTAAGTTGAGCAAGAAGCAAATATGT23.389830508474576No Hit
GCGCTATGCAGACCGCCGCCGCGGCCAGCGCCGCTCGGCGAGGCTGGTGC23.389830508474576No Hit
GGAATGGAATCTTCCGGAATGGAATGGAATGGAATGGAATGAAAGGCGAT23.389830508474576No Hit
GAGTGAGACTCTGTCTCAAAAACACACACACACACAACCCAAACACACAC23.389830508474576No Hit
GCGTCAAACTCCTGGGCTCAAGCAATCTTCCTGCCTCAGGCTCCCCGGTA23.389830508474576No Hit
CATTATGTCTATTTCAATTGGCCTCCTAGGAGTGTAGGAGACAGTGTAGG23.389830508474576No Hit
CATGTTGTCTGCAAACAGGGACAATTTGACTTCCTCTTTTCCTAATTGAA11.694915254237288No Hit
AGGTGCAAGTGACCATGTGCATCGGCGCGTGCCCGAGCCAGTTCCGGGCG11.694915254237288No Hit
CAGTCACTCTGAAATGACCAGCGACATCTCTTAGAGCCAAAATCAGTCAA11.694915254237288No Hit
CCCTCAGTGCTTCCCCTGTGCTCCCTGAGTATCGGGCACATCCCTAGATC11.694915254237288No Hit
CCACAGGGCTGGCTGTGCTGTACGAGAGTTCTCATAATCGAGATGCCCTG11.694915254237288No Hit
CAGCCGCGCGTCCGACTCGAAGCGCGTGACGGCGTGGGCGTGCGCGAAGC11.694915254237288No Hit
ATCTAGAACTAGAAATACCATTTGACCCAGCCATCCCATTACTGGGTATA11.694915254237288No Hit
AAACGAGAGTAATGGAGATCTGCCAGAAAAAGAATTTTGAAGGGTGCGGC11.694915254237288No Hit
GTGCTTGATCTTTACCTGATGCGATTCGCCGATTTGGCTGAAATCCAGGG11.694915254237288No Hit
TCTTCAAAATCTCTTTTGTCTAATCCTGTGTGCAGTCTTTCCCATAACGA11.694915254237288No Hit
ATCTTGCCCAGTATGCGGCCTACCACCGCGACGCGCGCAACATCGCGACG11.694915254237288No Hit
GGAACGGCCCGCTATGCTCGTCCTCCCCTTTGACCCGAGACCCGACATTC11.694915254237288No Hit
GGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGG11.694915254237288No Hit
GATACTATGTGATAGCTATTTGCCAAAGATGGCCTCTAGTATCCATGCTT11.694915254237288No Hit
GACGGCCATCACAATGGGCCAGGTCGCCGAGCCGTACCTCCCCCTTCGCG11.694915254237288No Hit
GCAGTTCCTCGAGCTGTGCGTCGACTTCGCCGATGTCGGCGGACAGCTGC11.694915254237288No Hit
ATGTATTGCACACTTAATATTGACTACAGTATAGTGTAAACATAACATTA11.694915254237288No Hit
ACTCTGATGAAGTGATATTTGAGCAGAGGCTTAAAGGAGTGAGGGACATG11.694915254237288No Hit
CGGGCAGATCACCTGAGGTCGGGAGTTAGAGACCAGCCTGACCAACATGG11.694915254237288No Hit
TTTTAGTAGAGATGGGGTTTCATCATGTTGGCCAGGCTGGTCTCGGAACT11.694915254237288No Hit
GTCCTGGAGCAGCCTGGTACCCTCAACTGCAAAGGAAAAAAGGTTATATT11.694915254237288No Hit
CTCCAAGTCAGCACTCAGGTGGTGCAATATTGATAGGTGTTTATCGGCGC11.694915254237288No Hit
TCACCATGCGTGAGATCGCGCAGGACTCCGGGCGCATCGAGGACATCGTC11.694915254237288No Hit
GATAGGGGGAGAAAGTAAAGGAAATATCCGCATGAATCAGAGAGCTTCCT11.694915254237288No Hit
GAATGGAATGGAAAGGACTGGAATGGAGTGGAATGGAATGGAATGGAATG11.694915254237288No Hit
GAATCGACAGGAATGGAATGGAATGGAATGGAATGGAATGGAATGGAATG11.694915254237288No Hit
TCTCAATTCCATTCTCTTCCTTTCTATTCCATTCAATTGCATTCCATTTG11.694915254237288No Hit
AGGCATGAGCCACCGCACCCAGCCACATTAGTTTTTAAAGCTCCCCAGGT11.694915254237288No Hit
TGGGAATAACGCCGCCGCATCGCCGGTCGGCATCGTTTATGGTCGGAACT11.694915254237288No Hit
CATATAAATCTCTTCAAAGGTTTTTAAGATGTTTAAAAGCCAGGAAATTT11.694915254237288No Hit
GAGTTTTATTTTCTAAAAAAACAATCACAGCCTCTGTTGTAAACTGAAAG11.694915254237288No Hit
GTTAGCCGGGCTGGAGTGCAGTGGCACGATCTCGGCTCACTGCAACCTCC11.694915254237288No Hit
GTGTAGCATTGCCTTTGTAAATGAAAAATAATACACATGATTCTTCTCCA11.694915254237288No Hit
CCAATACTCTGACCCCTCCTGCTCCATCCACGGCGCCCGCGGCACCATCC11.694915254237288No Hit
GTTTTAATGAGATGGTAAGGGGTGCATGATTGGTCGCCAAGGAGGGAGTA11.694915254237288No Hit
ATCACAAGGTGAAGAGATCAAGACCATCCTGGCCAATACAGTGAAACGCT11.694915254237288No Hit
CGCCTACGTCGTCGAGAACCGCCACCGCACGCCGATCGCGGTGCAGGTGC11.694915254237288No Hit
GTTCACTGCAGCATATTCAAAAAATTGTGAAGATTTGGGATCAACCTAAG11.694915254237288No Hit
GTATGCAGCTGTACAGTTTATATAGCACAAGCAGACTGTTTTCTTGTTTG11.694915254237288No Hit
GAATGGAATTGTCATCAAATGGAATTCAAAGGAATCATCATCAAATGGAA11.694915254237288No Hit

[OK]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)