FastQCFastQC Report
Wed 31 Aug 2022
EGAF00003674109

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00003674109
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences18
Sequences flagged as poor quality0
Sequence length146
%GC43

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[FAIL]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[FAIL]Overrepresented sequences

SequenceCountPercentagePossible Source
GGCTAGAGTGCAGTGGTGTGATCTCGGCTCACTGCAACCTCTGACTCCCA211.11111111111111No Hit
GTCTTCCATTTGGGGCCAGGCGGAGTCCTGAGGATGGACACAGGCACTGT15.555555555555555No Hit
GTGTTGACTAGTCTTCCCTCCTCTAGCCAAAGCCCATAGGTAGTAAACAA15.555555555555555No Hit
CAATGGAATCATCAATGAAGGGAATTGAATGGAATCATCATCGAATGGAA15.555555555555555No Hit
CATGGTGGCAGAGTTTGGAGTGAGAGGGAAATGGCTGCAGATTCTGATCA15.555555555555555No Hit
GTAATAGATGCACAAGTGCTTCTCATTTTAAGTAGATTTTTGTACGTCAT15.555555555555555No Hit
GATTTATTAGCAAAGCCAGTTCAGGAACAAGATCACCATGGTGAGTAAGG15.555555555555555No Hit
TAGCAGGTGTCTCCTCTATCTTAGGGGCCATCAATTTCATCACAACAATT15.555555555555555No Hit
CAGCGAGGCCAGGATGGAGCCGCCGATCCACACGGAGTACTTGCGCTCAG15.555555555555555No Hit
ATGGAATGGAATCTTCCGGAATGGAATGGAATGGAATGGAATGGAATCAA15.555555555555555No Hit
ACAGAGAGTAATGTGCTATAGACACATGATGAATTTAGGCCAATCTTTCA15.555555555555555No Hit
CTTGATTTTCAGTACGAATACAGACCGTGAAAGCGGGGCCTCACGATCCT15.555555555555555No Hit
CTCTTTTTGTGGATTCTGCAAGTGGATATTTGGATTGCTTTGAGGATTTC15.555555555555555No Hit
CATATATATTTCTTCAATTTTAGATATTTGGTAGATTCTTGCTGTCTGCT15.555555555555555No Hit
GCACATACACCAAATGTCTGAACCTGCGGTTCCTCTCGTACTGAGCAGGA15.555555555555555No Hit
GACACACAAAAGCTGAAAAAATTCATCACCAGCAGTTCCAAAGTATGTTA15.555555555555555No Hit
ATGGAATGGAATCTTCCGGAATGGAATGGAATGGAATGGACTGGACTCAA15.555555555555555No Hit

[OK]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)