FastQCFastQC Report
Thu 1 Sep 2022
EGAF00003674115

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00003674115
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences76
Sequences flagged as poor quality0
Sequence length146
%GC58

[OK]Per base sequence quality

Per base quality graph

[FAIL]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[FAIL]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[FAIL]Overrepresented sequences

SequenceCountPercentagePossible Source
CTCCATCACCAAGGCTGGAGTGCAATGGTACAATCATGGCTTGCTGCCTG22.631578947368421No Hit
ATGCAGCAACATGCGCGTGAAGAGCACGACGCCGAACTCGCCCACGCTCA22.631578947368421No Hit
CCCTGGCGAAGCGGCGCCCGGTGGCCTCGACCGGCAGGGTGCGATCGGCC22.631578947368421No Hit
TCCCTCAGCTGAGGCGGAGGGTATGGCAGGGCGCATCCTTGCCAATGCCT22.631578947368421No Hit
GTGTTTGTGTCCATCCTGGCTGGCCAACGTCTTAGCCTCATCCCCGTCTG22.631578947368421No Hit
CACTCAACCCTAGGTGCTGCCATGGGGTAGGAGCCCATGCTCCCCATGAC22.631578947368421No Hit
TACCAGAGGACTCGCGCATGCGCAGCGCAGCCTGGGCCGTCGGCCTGGGC22.631578947368421No Hit
CTCCTCACAACAGCCCGTTTTGAAAGATGGAGCAATTGAGGCTCAGAGAG22.631578947368421No Hit
GAAATCCGGCTGGAAACTCGCCAGTTCCCGGGCAGTTTCAATCAGCCCTG22.631578947368421No Hit
GTCTGACAAGACCCAGTGAGATGAACCTGTTACCTCAGTTGGAAATGCAG22.631578947368421No Hit
CCTTATAATAAATCTCCTTTCAGCCGGGCACAGTGGCTCACGCCTGTAAT11.3157894736842104No Hit
CACCAAGACCAGAAGCCTTTTCATCGCCTAATTTTAATGCTGTTAAACGC11.3157894736842104No Hit
CGCCCTCGATCTCGTTGGCCTGGTCGACCACCCACTGGGCGATGGCGCCG11.3157894736842104No Hit
CAGAGCGCACCCGTGAGGGAGGCTCCCGTGACCGCTAATTCGCCTCTGCA11.3157894736842104No Hit
ATGCTGTTCTCCGTGCCGAGGAGGTATTTGAGGAAGTAGTCGTTGCCCTT11.3157894736842104No Hit
ACATCCCACAGTCAAATTGGGCTCCTAGCCCTGGCCACATGCAGTGTTGC11.3157894736842104No Hit
GGAGCCCGGTGCGGCGTCGTTGTCGACCGTGAGCACCGCCGTCCCCACGT11.3157894736842104No Hit
GAAACACCTTTAGGGGAACTCCACTGTGCTACCGGATTTGACTGGTATCC11.3157894736842104No Hit
TGGGGGAAGAGGACTAGGTTGACACATTCTGCTGCTTTAACAAGGGCTAA11.3157894736842104No Hit
CCATGAATGGAAGGCCCCCTTGCACCATGACCCTTTGCTGGAGGGGAACA11.3157894736842104No Hit
GAATGAGAGCATGTCGTTGAGACGCAGGTTTTGCTCGGCTATGGTCGAGA11.3157894736842104No Hit
GCTCTACATCTATGCCGGAAGATATGGAAACGGCACGGCTTTCACCAACG11.3157894736842104No Hit
GATCCTTCGGCGTGATCTTGCCCGCCGCCGAAAGTGTGAGTCCATCCTCC11.3157894736842104No Hit
CCAAAGTGCATCGCACAGCACGAGACGGCCCTCTGCATCCGTATTGATGA11.3157894736842104No Hit
CCACACAGGGAGGATATGGCTTTGGCAAGCAGGACTTACACACCCATTCT11.3157894736842104No Hit
GTACCTGGACTCCATCAGCCAGGTCGCTGGTGTCGTGTTCCTGCTTATCG11.3157894736842104No Hit
ATACTCACCCTGTCGTGCTAACAAATACTAGGTCTCATTCATTCTGTTTA11.3157894736842104No Hit
CAGTATATGATTAGTCAATTTGCTAGTTTTGTATTCGGTGCGAGTCTCTT11.3157894736842104No Hit
GGGCATAGTGGCGCAGAACCGTGGGGTCCACCGCCCAGTTTTCGTTGATC11.3157894736842104No Hit
CCCCTTGGTCGTTTTCAACCTCCTCGGTCAGATACTTGTAAAGACTAGAA11.3157894736842104No Hit
GTCATCCCCATTTTCCAGGTGAGAAAACTGGCACAAGGAGGCAAAGCCAG11.3157894736842104No Hit
GTTGGCCGGGCTGGTCTCAAACTCCTGACTTCAGGTGATCCACCTGCCTC11.3157894736842104No Hit
GTCCAGGCGTGCCCGGTCAGTACCATGAGCAGGGATGAGATGATGCCGGT11.3157894736842104No Hit
CACTCGCACCCTTCAGTCAGATGGTAATTTAAGCTGGTTAAGTCCAAGCT11.3157894736842104No Hit
GTCCGTGCCGATGATCTTGATGCGGATCTCGCGCTCCTCCGCCGGATAGC11.3157894736842104No Hit
GAGCAGGCCCAGGACGATACGTTCCGCGCACGCTTTAAGCGTGAGGCGGA11.3157894736842104No Hit
CGCTCCGTCGATCATCATCGGTTTGTTCGTGTATGGTGCGATTGTTGTCC11.3157894736842104No Hit
CCTATGTCAGGAAATGGCGATTAACATGAGGTCGCTGGGTTACTTGTGAT11.3157894736842104No Hit
AGCATGTAGTTTGCTGCGTCGCCAACAACGGTTGCGGGAACGTTGATCTG11.3157894736842104No Hit
GGTCCTGGATGTTCAGGGCACCTCTGGGAAAGAGCACCTGAGAGTCAACA11.3157894736842104No Hit
CTCCAGCAGGGCGGTCAGCTCGGTCAGGCCCTCCTCCAGAAGACCGGTGG11.3157894736842104No Hit
CCGCCGTAGACGATGTAGTCCTTGTTGCCCTCGACCGTCCAGGTCGCCTG11.3157894736842104No Hit
GTCAGAGACCACTACACTCAATCATGGGCCCTTTTTCATACTCTTAACAA11.3157894736842104No Hit
ACATCGTCGTCATCAGCGTCAACGCCCAAAACCAAATCAGCAGCAATATG11.3157894736842104No Hit
GGTTATGTACCCAGTAATGGGATTCCTGGGTCGAATGGTAGCTCTGTTTT11.3157894736842104No Hit
GTTAGAAGGAAAACTAACAAACAGAAAGGAATAGCATCAACATCAACAAA11.3157894736842104No Hit
GTGGACTTCGTCGCAAATGTGCCTGTGCGCGCCGCCTATGTCGAGCGGCT11.3157894736842104No Hit
GGAACTCCCAGGCCGAAGCCGTGCTCCTCTCCGTTGACAGTGTAGTGGGC11.3157894736842104No Hit
GGCTGGGAGCGCCCGTCGGTGGGCGCACAGGAGCGGGAGCGAAGTCCTCA11.3157894736842104No Hit
AAGTTGAACTCTGTGAGTTGAGTTCACACATCCCTAAATCTGTCTCTTAT11.3157894736842104No Hit
CAGAACGAGACTCCGTCTCACACACACACACACACGAAAGATGTGGCCTC11.3157894736842104No Hit
GCGCGTAGTCGATCGCGGCGGGCGGCGATAGCGGCTCCGAGCCCGTCGGG11.3157894736842104No Hit
GAGGGCCACCAGCGGCGGGATCGTGAAGGTCGCGTCCTGCGGCCCCCACA11.3157894736842104No Hit
GATAGCACACACCTGAAGTCCCAGCTACTCAGGAGGCTGAGGTGGGAGGA11.3157894736842104No Hit
CGGGTACGCCTGGCTGTGCGGCGAAGCCGGTCTGGCAAAGGCGGCCCGCC11.3157894736842104No Hit
GCTTAGCACAGGGGGAGAGACTCCATTTGTTTGGGAGAATGTAAAGGCTG11.3157894736842104No Hit
CCCCTGTGCCAGCATCAGCTGGTGGGGCAGATGGCAGTGGGCTCTCTGGA11.3157894736842104No Hit
GATGAGGTTTCACCATATTGGCCAGGCTGGTCTCCAACTCCTGACCTCAA11.3157894736842104No Hit
CATCAACGGGGGAGGCCAGGCGAACGATCGGGTAGACCGTGAGCTGGCCG11.3157894736842104No Hit
CAGATCCTGCTGATGAACGTCGGATTCTTCGGCATCCAGTACTCCTTCGG11.3157894736842104No Hit
GTGAAGGGAAGGCTTCAGATGGACAATTTGTGTGCTGGGGAAAAAATGGA11.3157894736842104No Hit
CCGCTGATCCGCTCCGCGAAGATCTGAGTACAGGCCAGCCAGGGTGGGTT11.3157894736842104No Hit
GCGGAGCAGGGGCTCAATGACAGCATCCCGCAGGCAACGACAGAAAAGCT11.3157894736842104No Hit
AAGTTACCCAATCAGCCTGCGCCTTCGGCTTGGCTTCTTGCTGTCTCTTA11.3157894736842104No Hit
GTCCGACCCCGCTGCACAGCGCGGATATCGAGGTTCCTGACCTGCGCGGT11.3157894736842104No Hit
GAGGCCTACCACGATTTCGCACTGGGACTGGTTGACGGTTCTTGGCGCGA11.3157894736842104No Hit

[FAIL]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)