FastQCFastQC Report
Thu 1 Sep 2022
EGAF00003674116

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00003674116
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences76
Sequences flagged as poor quality0
Sequence length146
%GC59

[OK]Per base sequence quality

Per base quality graph

[FAIL]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[FAIL]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[FAIL]Overrepresented sequences

SequenceCountPercentagePossible Source
CTTTCCTTCTTCGAAGGTGTCGCCGAGGCGGCGAAGGAGGATCGCTACGC22.631578947368421No Hit
GCCACAGGGGCAGAGGCCGTTGCGACCGACGCGCGCCAGTTGTTCCGGGG22.631578947368421No Hit
GGCCTAGGCGTCGTCGCGCATGCGTAAAACTGCTGGCGGGAGTTAAGAGC22.631578947368421No Hit
GCATTGGCAAGGATGCGCCCTGCCATACCCTCCGCCTCAGCTGAGGGACT22.631578947368421No Hit
GCCAAATAGGAACAGCTCCAGACTACAGCTCCCAGGGTGAGTAACGCAGA22.631578947368421No Hit
GCCTTGGACAAGCTAGTTCTCTCTGAGCCTCAATTGCTCCATCTTTCAAA22.631578947368421No Hit
CTTGCAGGGCGTGCGATGGGTGTGACTCGCTTCTTCAGTACCCTGCAGCT22.631578947368421No Hit
CCTCCACAGTGGTCACTGAGATGGCGGGGTTCCCACCTGAGCCCCTTCCC22.631578947368421No Hit
GCAGCAAGCCATGATTGTACCATTGCACTCCAGCCTTGGTGATGGAGCTG22.631578947368421No Hit
CTTAGACACGGATGCACGGAGCAAACTGCGCATCTCGTTCGAGTTTTTCC22.631578947368421No Hit
GGGTCACCGCGGCCGCTGGAGCGGGCTTCTCCTCGGGCGAGGGCACGAAG11.3157894736842104No Hit
GAACATCACCAAACCCGCCGACGGCTCCCAACCATTGCTGTCGCTGGACA11.3157894736842104No Hit
GAGAATGGGTGTGTAAGTCCTGCTTGCCAAAGCCATATCCTCCCTGTGTG11.3157894736842104No Hit
GACACATGGGAGACAGGGAGAGGCCACCTGAGGCCACAACATCACAAGTA11.3157894736842104No Hit
GGATACCAGTCAAATCCGGTAGCACAGTGGAGTTCCCCTAAAGGTGTTTC11.3157894736842104No Hit
GTTCTTATCGTGCTAGCAATCATGCTTCCGCTTATGATGCGTGAATCTTG11.3157894736842104No Hit
AATCAAAGCAGGAGAACAGTTTCCTACGAGGTGTAGCCTGGGAAAGTTGG11.3157894736842104No Hit
GGTCTGTTCCTCCTCGTGTGCCTTGTCGCCTAATTCATAGGCTTTGAGCT11.3157894736842104No Hit
CCACCAGGCTGGAGTGCAGTGGTGCCATCAGAGCTCACTGCAGCTTCAAA11.3157894736842104No Hit
CACCGTCGGCGTCTTCACGGCCATGTACTTCGTCGTCTTCTTCGGCTTCG11.3157894736842104No Hit
GCTCAAAACTAGCAGCATAGACCGGGCACTGTGGGTCATGCCTGTAATTC11.3157894736842104No Hit
ATTTAGGGATGTGTGAACTCAACTCACAGAGTTCAACTTCTGTCTCTTAT11.3157894736842104No Hit
GAACCTGTGCTTCAGCTGCAGAAGTAGCCCGGGCACAGTGGCCCGCACTG11.3157894736842104No Hit
CGCCCGACGCGGCCATGGTCTCAGGCGTCCAGGTAGCGCACGCGCGCGTC11.3157894736842104No Hit
CGCACTGACGGCGGCGAACGAAAACGCACACTACAATCACGCAGCGGACT11.3157894736842104No Hit
TAACCGACTCATGCAGAATCTTGTCTCGACCATAGCCGAGCAAAACCTGC11.3157894736842104No Hit
CGCGCATCGTCGGGGAGGTCGCGATGTGACCGCGGCCGAGCCGGGGAAGG11.3157894736842104No Hit
GTTGACGATGGCGGTAACGACGTCGCGGAATCCGGGTACGGCGGCGGTTT11.3157894736842104No Hit
CAAGAAGCCAAGCCGAAGGCGCAGGCTGATTGGGTAACTTCTGTCTCTTA11.3157894736842104No Hit
CTTTCAGCTGGTTTTCGTTGGTGAAAGCCGTGCCGTTTCCATATCTTCCG11.3157894736842104No Hit
GCCGGTGACGGGTCCGGCCAGATTGAGGATGGGGATCTCGTCAGCGGAAG11.3157894736842104No Hit
GATTGTTAAGAGTATGAAAAAGGGCCCATGATTGAGTGTAGTGGTCTCTG11.3157894736842104No Hit
CGACGAGACCGACATCCTCCTGTCGAAGGCGGCCCCCGCCAGCGACGAGG11.3157894736842104No Hit
ATCACTGAGGGGCTGGCCCTGGTCACAGAGACCTCTGTGGACCTCAGTGT11.3157894736842104No Hit
GTCTCGCCTCTTGCGATCGAGACGTCGGGGCACGGCGCACTCTCGGAGAA11.3157894736842104No Hit
ATCAAATCCCGACTACGCCAAATAAAGAGACTCGCACCGAATACAAAACT11.3157894736842104No Hit
GGTTTTTCCTTATCTTCATGGAGTTATCTACCTTTGGTCTTTGATGTTGG11.3157894736842104No Hit
TCAATCGCCTGTGCGAGACTCCTCTCTGCCGCAAGCGTGTCTTCCCCCCC11.3157894736842104No Hit
ACATGTATCGCGGCCGGACGCGCCATGGCGGCCCATGACGGCCTCAGCCT11.3157894736842104No Hit
GTATACCGCAACAATCGCAGGATTGTTCAGAGACGCGACAGCCTCCGCCT11.3157894736842104No Hit
ATGTTAAACAGAATGAATGAGACCTAGTATTTGTTAGCACGACAGGGTGA11.3157894736842104No Hit
GCCGTAACCGGGTTGATGCATGTGCTGGCATCGCGCAAGGCCAGGGCGAA11.3157894736842104No Hit
TCTCAACACTTTGGGAGGCTGAGGCAGGTGGATCACCTGAAGTCAGGAGT11.3157894736842104No Hit
TCCTGCCTGATGCCCGCTGGGAGCCACTCTGACCTCTAGGGCACACAACA11.3157894736842104No Hit
GCGGGAATCCCCGTGACCTACGCGTGGAACGGCCACCAGCTGCCCGACGA11.3157894736842104No Hit
TGCTTATACACTGTTGGTAGGAGTGTAAACCAGTTCAACCATTGTGGAAA11.3157894736842104No Hit
CAGTATCACAATTAGTGTTCTCTTGCAGCTTGGACTTAACCAGCTTAAAT11.3157894736842104No Hit
ATGTTGGCCAGGCTGGTCTCAAACTCCTGACTTGGTGATCCGCCCACCTC11.3157894736842104No Hit
CCTTTACATTCTCCCAAACAAATGGAGTCTCTCCCCCTGTGCTAAGCCTG11.3157894736842104No Hit
GTATGGGCCTTGGAGCAGGATCCTGCCTGAGGAGTTTCTGTGTGTGTGGT11.3157894736842104No Hit
TTCTAGTCTTTACAAGTATCTGACCGAGGAGGTTGAAAACGACCAAGGGG11.3157894736842104No Hit
GTATGGGCGCCGGTGGAGGGATGCCTCTTTATCCTCCAGGCGCGATGGGA11.3157894736842104No Hit
CGTCCGCACCAAGCTGCGCAACGTTACCTCCGGCAAGGTCGTCGACCGTA11.3157894736842104No Hit
CAGACACCCTGGACCCCAATAAAGGCTCGTTCGGTGACTTGAGTTGGGGA11.3157894736842104No Hit
CTCTGTAATGGGGCGGCGCAATTCGGGGTCCTCGACGCGGGCGAGTGCCG11.3157894736842104No Hit
ACCCTGGACAGTCAATGGCCTCTGTCCGACGACGAACGCGCCTCCAAACC11.3157894736842104No Hit
GCCTTGGTTATTGCGTAGCCCCTGAACATCAATGCTGTCGCGCCAAGAAC11.3157894736842104No Hit
TCGTCGACAAGCTCGACAAGATCGGGCCGGAGAAGGTGGCGGCCGAACTC11.3157894736842104No Hit
AAGTCTCTAAGCCCAAGTATCTACCAGTGATGTAAGATCATAACTGACTT11.3157894736842104No Hit
CAAGTCAGATTTGCTAAACCTGGTATTGCTCCTTGAATATCCTTACCTAT11.3157894736842104No Hit
AGACTGAAGAACTGATTGCTCAGGGCTGTGAACAGCAACGGCGCAGTTTC11.3157894736842104No Hit
GCCACACCCACGACTGCTCGAACATCGGCGGGCTGCCCAACGCCAGGGAG11.3157894736842104No Hit
AGCTGCTCATCGCGGCCCGGGTCCTGATCATCCAGCCCCGGGCCGATATC11.3157894736842104No Hit
CGACAAGACTATTCGCTATGAGATCGGCATCATGGGCGGCAATGCGCGCA11.3157894736842104No Hit
CCTGGGAACGACCCGACGGCGCCTTCGTCGAACCGGGCCACGTACCGGTC11.3157894736842104No Hit
GTCTTAGCCCTTGTTAAAGCAGCAGAATGTGTCAACCTAGTCCTCTTCCC11.3157894736842104No Hit

[FAIL]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)