FastQCFastQC Report
Thu 1 Sep 2022
EGAF00003674122

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00003674122
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences111
Sequences flagged as poor quality0
Sequence length146
%GC53

[OK]Per base sequence quality

Per base quality graph

[FAIL]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[FAIL]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[FAIL]Overrepresented sequences

SequenceCountPercentagePossible Source
CCCGCGAATCGAGCGCTTAAGCGCGCGCCTCGAAGATCAAATTGAACGGC43.6036036036036037No Hit
GGTCATCGACGTCGAGATCATCTGCAACCAGCTCGGCTACACGCCCGCCA32.7027027027027026No Hit
ATACAGGGCAGGGTATTTGTCCTTGAGAAAAGTAAACAGCTCCAGTAGCC32.7027027027027026No Hit
GCCGAAGGCGGGCAGATCGGCACCAACATCAACCTCAACGGCTTCTCGGC32.7027027027027026No Hit
CTACATCGACCTCGTCTGCAACGAGATGCTGCCCGCGCTCGCGGCCGAAG32.7027027027027026No Hit
GAATCAAATAGACGTGATAAAAAATGAAAAAGGGGATATCACCACCGATC21.8018018018018018No Hit
GAATATAGGTCCCCAGTCTCTTCTGGCTTGTAGGGTTTCTGCTGAATGGT21.8018018018018018No Hit
CGCGAAGGCGATCCGGCGCAGCGGCCCGATGGCCGCTCGCAGCTGCTGAA21.8018018018018018No Hit
GTTCAAGACCAGCCTGGCCAACATGGCAAAACTCTGTCTTTAAAAAAAAA21.8018018018018018No Hit
GTCTCTATGTATGCACTAGTGTAACAAATCAAAACAAAACCAATATTAAG21.8018018018018018No Hit
CTGATGACGTCCATGTGAACATCCGGCTAGTGGAGGTGTATCGCTCAACT21.8018018018018018No Hit
CCTGAGAATTTGCATTTCATCTCCTGGGTGATGCTGATGCTGCTGATCAG21.8018018018018018No Hit
CAATCATAGGGATAGCGCGCCATGAATTCGCGCACCCCGGCGAGCGGCGG21.8018018018018018No Hit
CGTCAACACCAGTGCCTGTTACGGCTTCGTCTTCGACATCTGCGGCCTGG21.8018018018018018No Hit
GTCCATTCCGTTCGATTCCCTTCCATTCGATTCCATTCCATTGGAGTCCG21.8018018018018018No Hit
CCCGGGACCTCTTGCCCCAATTCCTCCGCCTTGCCGGGAAAGGTTGATCC21.8018018018018018No Hit
GCGCGTCACGGTGAAGCCACATTCTTCCATGATGGACAGCTTGGCTTCGG21.8018018018018018No Hit
GGACTCCTGCAATGACTTCATTTTTGCCCATGCTTCAGGTAGTCTTGCTT21.8018018018018018No Hit
GCAGCACCCCTGGCTCCAGCACCCCTGGGCCGGGCACCCCGGTCCCTACA21.8018018018018018No Hit
ACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTTTATATAGGAAGA10.9009009009009009No Hit
GCAGATAGTTGCGAAGGGCCGCAACCGATGCCACGTAGTGAGAGGCCGGG10.9009009009009009No Hit
ATAATAGCCTTATAAGATAGGTACTATTATTCCCACATTACAAGGGAAGA10.9009009009009009No Hit
CTTGAGTACACACATCACAAGGAAGTTTCTGAGAATGCTTCTGTCTGGTT10.9009009009009009No Hit
ATGGAATGGAATGCAATGGAATGGAATCATCCGTAATGGAATGGAAAGGA10.9009009009009009No Hit
GGCTGGGGAGCTTCGTTGGTTTTCCAACCGAAGAGCCCTGTGGACGTGGG10.9009009009009009No Hit
GATGATATAAACATCGTAACCACGGACACTTTCTTCAATGTTGACCTGGA10.9009009009009009No Hit
GTTTTCTGGAAGGCGAGCATCGTTTGTTCGCCCAGCTTCTGTATGGAACG10.9009009009009009No Hit
GGTAAGGACACCCTCGTCAATAAACGGTGCTGAGAAACCTGGATATCCAT10.9009009009009009No Hit
GTCTTTTTCTAGGAATAGTTACCCTATTATCTCTTGCCTCATCTTCAAAG10.9009009009009009No Hit
GGACTAGAGTGAAATGGAATCGAACCACAAGGAATGGACAAGAATAGAAT10.9009009009009009No Hit
GTTATCCAACAACTGCTTTAGCTCCTGCTGTGTACTAGGTACTATTGTTG10.9009009009009009No Hit
CCTTTATCATTTTTTATTGCGTCTATTTGATTCTTCTCTCTTTTTTTCTT10.9009009009009009No Hit
CCTCCCGGTACCCGACCAACCGGTCGACGCCGGCGGGCATGGTGACCGGG10.9009009009009009No Hit
CGCTGGTCGACTGCCCCGGGCACGCCTCCCTCATCCGGACCATCATCGGC10.9009009009009009No Hit
TATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTGGA10.9009009009009009No Hit
TCTGAAACTATTCCAATCAATAGAAAAAGAGGGAATCCTCCCTAACTCAT10.9009009009009009No Hit
GTATCAACGCAGAGTACATGGGAAGCAGTGGCTGTCTCTTATACACATCT10.9009009009009009No Hit
CCCCGGAACCAATGCGCGGCTCGGGCCTTCTCGTCATCGGCATTGCAGAT10.9009009009009009No Hit
ATTTTGCAGGAGCTCAGCCCTTGAGAATGTTTTCGGAGTGGAGAGAGGAA10.9009009009009009No Hit
GCTCGACGCTGCCGAGTTCGCCGACGCCCGCCGCCGCGCCCAATCGCGCG10.9009009009009009No Hit
ATAATAGCCTTATAAGATAGGTACTATTATTCCCACTTTACAAGGGAAGA10.9009009009009009No Hit
ACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTTTGTTATGGGAAT10.9009009009009009No Hit
GTCTAGGACAGGAAGATCTTCACTATCACTGCTTTGTCCTGTTCCATTCT10.9009009009009009No Hit
TCTTAATTCATTCTTACAATTATTCTGAGGTTACAAAAATGGAAGGGGAA10.9009009009009009No Hit
CTCTGTAGAGGAAAACAGAGGGACCCCACCTCTGAGTGAGCACCTGAGCT10.9009009009009009No Hit
ATGAAAAAATGTTCAACATCACTAGTCACCAGGGAAATGCAAATTAAAAC10.9009009009009009No Hit
CCTCTAACAAGGTCATCCTGAAGTTATCACTATCCCTGAGCAAAAACTGA10.9009009009009009No Hit
TCCTTTGTAGTATCTGGAAGTTGAAATATGGATTGGTCTCAGGCCTATGT10.9009009009009009No Hit
TAGAGGAACAGGTAAGTGAATAATGTTAAGGAAACGAAGATGAATTAAAT10.9009009009009009No Hit
ATACAGGGCAGGGTAATTGTCCTTGAGAAAAGTAAACAGCTCCAGTAGCC10.9009009009009009No Hit
GGCCTCCAGAAAGCGGCGCGGATTGACCGCAACGCCGTTCAAATGAACTT10.9009009009009009No Hit
GCCTGAGAGAGCACCGACATCACGCGGGCGTTGAGCCCGTCGCTGATGCT10.9009009009009009No Hit
CTTGTACACAGTGTCTCTACTTAGTGATTGATAAAAGTTCTTGGCTGGGC10.9009009009009009No Hit
TCGCGGATCACCGCGATGTTGGCGGCCGTGAAGCCCAGGTTCTCCGCGGC10.9009009009009009No Hit
GCCTCCTTTCTAAATGCAGCGACCTGTGTTCTTCAGGCCTATCCCTTTCT10.9009009009009009No Hit
TCAGTAGGGTAAAACTAACCTGTCTCACGACGGTCTAAACCCAGCTCACG10.9009009009009009No Hit
ATACAATGCAATTCCATTTGTCTATTTTTCTTTTGTTGCCTGAGCCTTTG10.9009009009009009No Hit
CTATGCTTAGTCCTGAGTGGTCCTAGCAAACCACGGAACCTGGGGACATC10.9009009009009009No Hit
GCCTCCAAGAAGTCTGGGATTATGTTAAACGACCAAACCTAACACTAATC10.9009009009009009No Hit
TTGTACCTCTGGTAGAATTCGGCTGTGAATCCATCTGGTCCTGGACTCTT10.9009009009009009No Hit
GGAATTGACTCCAATGGAATGGAAACGAATGGAATGGAAGTGAATAGAAT10.9009009009009009No Hit
GGGAAGGAAAGAACTTGCATGTTGGTGAAGGAAGAAGTGGGGTGGAAGAA10.9009009009009009No Hit
GGATGGCCCTGGTGCCGGTCCTCAAGAACACCGGGCTGGCGGAGTTGCTG10.9009009009009009No Hit
GAACGCACACATCACAAAGAAGTTTCTCAGAATTCGTCTGTCTAGTTTTT10.9009009009009009No Hit
CCAACGAGAACAAAGACACAACATACCAGAGTCTCTGGGACACATTCAAA10.9009009009009009No Hit
CAGCACGCCGATGTCCGGTGCCAGCGCACAGCCGATGCTCGCCGCGACGA10.9009009009009009No Hit
AACCCGGGAGGCAGAGGTTGTAGTGAGTCGAGATTACTCCACTGCACTCC10.9009009009009009No Hit
CAGTGGTATCAACGCAAAAAAAAAAAAAAAAAAAAAAAAAAATTAAGATG10.9009009009009009No Hit
TCATTAAGGCTCCGCCCGTCCAAGCTATCCAGATCGGAGGGAGACTGTGG10.9009009009009009No Hit
AGGCTGCAGCGGCGAAAGCCAAAGCGGCTGCCGCAGCGACCAAGGACCAG10.9009009009009009No Hit
CCGTGAGACTGCTTGCCGGACGCGCGAGGTAGCCGCCCACGACCAGGAAC10.9009009009009009No Hit
ATGCGGTGACCCAGGCGCGCAGCCTTCCTGCGCATGCCTCCAAGGAAGCG10.9009009009009009No Hit
ACTTCGAGCTGACGGTGTTGCCGGAAAGCGAGCCGCTGGTGGCCAACGTG10.9009009009009009No Hit
GTCTAAACCCAGCTCACGTTCCCTATTAGTGGGTGAACAATCCAACGCTT10.9009009009009009No Hit
ATCCGAAGCTCAAGGTCATCAAGCTGGAGCAGAACTACCGCTCCACCAGC10.9009009009009009No Hit
CTTTAAACTCACTTACATAAAGCCTTTCTGGGCTGTGGCTTTCTCATACT10.9009009009009009No Hit
CTTCATTGGTCTGTCTTCTTTCAAGATTTTCTTTTTCTGTGTTTACTTTT10.9009009009009009No Hit
GGCTCATGGTAAGTCCTGAGCCTCTGGTTGACACGTGTAATGAGTGTGAC10.9009009009009009No Hit
CTGTAGAAGTTCCAGCCTATACAGATCCAGTCGGCACAAGTAGTACGGAT10.9009009009009009No Hit
CCCAGGCGGCCAGCGCGACGATGTAGCAAAGCGCAACCCCGTTGCGCACC10.9009009009009009No Hit
GGCGTATCGGGCGCCAATGCACGATCTCGCCGGAAAAACCCTGATCGTCC10.9009009009009009No Hit
ACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTTGTGATAGGAAAC10.9009009009009009No Hit
GCGTAGTTGAGGCCCAGCGCGAGGATGGTGCGCGGGCGCGCGGCGGGCGC10.9009009009009009No Hit
TCTAGTGACTGTGTGCCTGTCCTCTCACGCCCCTTGTGGTGTTTGTCTGG10.9009009009009009No Hit
TATGTGTACGTACCTATGTGTAGTAAGAATATTTAAGTTCTATTTCCTGG10.9009009009009009No Hit
GGTATCAACGCAGAGTACATGGGTCCGCACGAGATCTACATCTTTCCCTC10.9009009009009009No Hit

[OK]Adapter Content

Adapter graph