FastQCFastQC Report
Thu 1 Sep 2022
EGAF00003674124

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00003674124
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences153
Sequences flagged as poor quality0
Sequence length146
%GC47

[OK]Per base sequence quality

Per base quality graph

[FAIL]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[FAIL]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[FAIL]Overrepresented sequences

SequenceCountPercentagePossible Source
GACCTCTCGCGTGTGCGGGCCAATCTCGTCAAGCAGGACACCCTGCACCG42.6143790849673203No Hit
CTCTTAAAATGCACCACGTTCATAACTTTTGCAGCTTGAGGTGCAACAGG42.6143790849673203No Hit
GAATACAGGAGAACAAAGATACAAAGATACAAATGTTGGCGGATATATCA42.6143790849673203No Hit
ATTTTCAGTAGAGATGGGGTTTCACCATGTTGGCCAGGGTGGTCTCGAAC31.9607843137254901No Hit
ATCTACATCAGCCACCGCATGGCTGAGATCTTCGCGCACTGCGACAGCGT31.9607843137254901No Hit
CATTCTGTTTATCTGACATCAGGTTAAGACATAATTGTATGTATGTCATG31.9607843137254901No Hit
ACATAACGTTGCACCAAATAGAAATGTATATTTTATTATGCAATGCCTTA31.9607843137254901No Hit
GAGCAAGAATCGGGACGAGGACCGCTAGGAGCATTGCCGGAATCCCTGTC31.9607843137254901No Hit
GTGGTGGGTGCCTGTAATCCCAGCTACTCAGGAGGTCGAGGCAGGAGGAT31.9607843137254901No Hit
CATAAAGATAATAGTTAAAAAGCTTGGGTGAAGATTTCGTTTGGAACTGG31.9607843137254901No Hit
GAGGTTAATGAAGAATTCATTTTGCTGTTGCCCAGGCTGGAGTGCAGTGG31.9607843137254901No Hit
CGGGGACACCGGGGGGGCGCCGGGGGCCTCCCACTTATTCTACACCTCTC21.3071895424836601No Hit
GTGTTTTGTACTCAAGCTCAAAGGATAGAGGACAGACATTAGCAAACTTG21.3071895424836601No Hit
AGAATTCCTGTGGTGGCAGCAGTAGGTGGTGCCTAGGAGAAACAAAACAC21.3071895424836601No Hit
GTACCAGACTGCAATGTGAAAAGTTTTCTGCCAAAGAGAAATAAAGAAAA21.3071895424836601No Hit
GAGCTCAGCACGGTGGAAAAAAGTCTCACTTTTGAGAAGCTGTGAGTTTC21.3071895424836601No Hit
GTACTCTGCGTTGATACCACTGCTTCCCATGTACTCCTGTCTCTTATACA21.3071895424836601Clontech Universal Primer Mix Long (96% over 26bp)
GATCAAGCGAGCTTTTGCCCTTCTGCTCCACGGGAGGTTTCTGTCCTCCC21.3071895424836601No Hit
ATAACACCCAAAGCAATTTTGAGAAAACAGAACAAAGCTGAAGGCCTTAA21.3071895424836601No Hit
TCCATGGACTCGAATGCAATCATCATCGAATGGAATCGAATGGAATCATC21.3071895424836601No Hit
ATTCCATACTGATATCAACTGATGAGCTGAACTTTATGTTTGCTTTGCTC21.3071895424836601No Hit
CCTGTAATCCCAGCACTTTGGGAGGCCGAGACAGGTGAGTCACCTGAGGT21.3071895424836601No Hit
CATGTACTCTGCGTTGATACCACTGCTTCCCATGTACTCTGCGTTGATAC21.3071895424836601Clontech Universal Primer Mix Long (96% over 26bp)
AGTGGAGCCTGCGGCTTAATTTGACCCAACACGGGAAACCTCACCCGGCC21.3071895424836601No Hit
GTCAGAGTTTACAATTTGCTTGAGGACATAAAAGTGAGTATTTGCCAGCG21.3071895424836601No Hit
CCCGGAGACGAAGCCGCCGTTCATTCTCTCCAGCAGCCAGTGGAAGCCGA21.3071895424836601No Hit
CTGCTTCCCATGTACTCTGCGTTGATACCACTGCTTCCCATGTACTCTGC21.3071895424836601Clontech Universal Primer Mix Long (96% over 26bp)
CCTTGTCACCAGTCACCCAGGCTGGGTTGAGGGACGGCCCAGGAGAGGTG10.6535947712418301No Hit
CATCAGGGTGGTGGCTGCTGAAAGTTAGGGTAGCTGCAGAAATTTCTTAA10.6535947712418301No Hit
GTTCGACAGCGACGCCGCGAGTCCGAGAGGGGAGCCGCGGGCGCCGTGGG10.6535947712418301No Hit
ACAGGGTTCTCTAATCCATGTGGAGTGTGTGCATATATGTGTGTGTGTGT10.6535947712418301No Hit
GTTAAGCATTTCAGCTTGTACAGTAAAACCATTGTGGTGATACGCTAATT10.6535947712418301No Hit
GGTAAAGACATTGCGAATAAAATGGTTAAAATGGCTCGTCCAAATATTGA10.6535947712418301No Hit
GTATCAACGCAGAGTACATGGGAAGCAGTGGTATCAACGCAGAGTACATG10.6535947712418301Clontech SMARTer II A Oligonucleotide (100% over 25bp)
GAATAGAATGGAATGGATCGTTATGGAAAGATATCGAATGGAATGGAATT10.6535947712418301No Hit
GCTGTGATTCTTACAGACTCCTAGAGGTACGGATTACCAAGTCCGTACCT10.6535947712418301No Hit
ATCTTACACTGAAAAAACCTATCAGACAACAAACTGGAGTTGGTTAAGAC10.6535947712418301No Hit
CATAGAAACTACCCAGAAGCATTCTGTGAAACTTCTTTGTGATGTTTGCA10.6535947712418301No Hit
ACACGGAGGACCGGAGCGGCCTGTCCGAGGTTGTTGAGGCATCTTCATTA10.6535947712418301No Hit
GTATTAGGGTGATGCTCTCTTCATAAAATGAGTTAGGGAGGAGTACCTCC10.6535947712418301No Hit
GCGCGCCGTGGGGGGGGGGGAGCCGACCAAAATAAAATAAACCAGGCTCA10.6535947712418301No Hit
TCCTTCCACTGGAGCCGTGCTCAGCAACATGTAGGCTTGTTCCCCGCTGT10.6535947712418301No Hit
GAATACACACCACAAAAAGAAGTTACTGAGAATTCTTCTGTCTAGCATTA10.6535947712418301No Hit
CCATAAACCACATCTGTTAGGGCCCTAAAGATCAAACGGCAAATTACAGA10.6535947712418301No Hit
GCTTCAAAAAGCAAAATTTGAGTTGTTAGAATTCATTAAACATTTTATAA10.6535947712418301No Hit
GATCATACCACTGCACTCCAGCCTGGGCTACAGAGCAAGACTCTGTCTCA10.6535947712418301No Hit
CCTTTTATTTTTATAAGGTCAAATATTTTCCTAAATGTTTACTAGTCATT10.6535947712418301No Hit
GTGTGTGAGTGTTTTCCCAGGGGGGCCGTCTGCCCCCAGCCGGCCACACT10.6535947712418301No Hit
CTTCTTAAATGGTGAAGACTCAGGGTCTAGGGGTGCCTCAGGCCCCATGG10.6535947712418301No Hit
ATCTTCGGCACCGAGAAAGACAAAGTCAACTGTTCATTTTATTTCAAAAT10.6535947712418301No Hit
GACTCTTTACCATTGCTGTCAGGATGGCTGAGCCAGAACCTGGCCTCTCC10.6535947712418301No Hit
AATTCAGGTTGTAAAAGTGTTTTCTTAGATTTCCTAATTAACAGCTGGGA10.6535947712418301No Hit
TATTTATTTTCTATTGCTTCATTTTTGTTTCTCCCCGTAAGAGAAGATTA10.6535947712418301No Hit
CATCAGGCCCAGGGAGCCCCCCAGCAGGGCCAGGGACCGGCAGAGCTCCA10.6535947712418301No Hit
GCCGGTGACCTTCGACCTTGCGCGCAGCGCGCTGGTGGTGGTCGACATGC10.6535947712418301No Hit
CCTTTATTTCCTCTAATTCATTGTAAAATAAGGAGGTCTTGGGTGGGTGT10.6535947712418301No Hit
CTTGCCTACACCTCGGACAACCGCGCCTCCGCAGCGGAGATTTTGGGGGT10.6535947712418301No Hit
CTACCGGGGTGATACCGCCGTATTCCATCCCGGACATGCCAACAGCCTCA10.6535947712418301No Hit
GGGTAAATGTTCCCATCTCAAGTGGGAGAAATTGGCCAAAACAAAGGGGC10.6535947712418301No Hit
GATAAAGGGGAGTCGTGAGAAATTTTATGGTTTACAATTAAATGGCAGGC10.6535947712418301No Hit
GAATAATGTTTCCATAGCTCTAAGACAAATAGTAAAATGAGGTAAATGTT10.6535947712418301No Hit
TCGACGAAGCGCACCGCATCGCCCGGCTGCAGCAGCGCGGGCGTTTCGCG10.6535947712418301No Hit
CGACCAACTCGTCAGCCATGGCGTGCCCCGGGTAGACATCTGGGGACGTG10.6535947712418301No Hit
CTGTCTTCCACAATGGCTGAACTAGTTTACAGTCCCACCAACAGTGTAAA10.6535947712418301No Hit
GAATAGTCAAGAGTGAAGAATGTGTGGTGAAATATTTGATAATTCCAATC10.6535947712418301No Hit
ACCCAAATAAAGTTAACAATACTTAAACGCTAACATGAAGTCAATAAATC10.6535947712418301No Hit
TTGTACAAAAATGTAAGCTGAAAAAAGAACATAAAATTTAAGTTTTCAAA10.6535947712418301No Hit
GAGCCACCATGCCTGGCCCATCTATCGTATTTTTTAAAACGCGGATCACG10.6535947712418301No Hit
GTGGTGGCCAGCGCCTCCCGCGTGGGCAGCGGATGCCGGCCGCCTTGCGC10.6535947712418301No Hit
GAGCCACCATGCCTGGCCCATCTATCGTATATTTTAAAACGCGGATCACG10.6535947712418301No Hit
CCTGGTTGATCAGTGCAGTGATATGTCACAATGCCGTGTAGCCAGAGCCT10.6535947712418301No Hit
GACTGGTGTAGAAGATCAAGCATTCAAGGAAAATACATTTTTTTTAATTG10.6535947712418301No Hit
GAATGATGGTTTCCAGCTTCATCCATGTCCCTGCAAAGGACATGAACTGA10.6535947712418301No Hit
CGTGTTACTCACCCGTTCGCCGCTCGTGTACCCCGAAAGGCCTTACCGCT10.6535947712418301No Hit
GGACTGCAGACACAAAGCGAATGGGCACACCGCATAAGACTGGGAGATCT10.6535947712418301No Hit
GTTTCAAGATGCTCGCATATTGTAAACTGGACATCGTATATTAATCACAG10.6535947712418301No Hit
AGCCAGACCATTGCCCTCTTGAACATTTACCGTAACCCTCAAAACTCTTC10.6535947712418301No Hit
GAAGGGAATCGAATAGAATTATGGAATGAAATCCAGTGTGATCATCATCG10.6535947712418301No Hit
GTTCCCCTTTCTGTGTCCATGTGTTCTCATTGTTCAGTTCCCACCTATGA10.6535947712418301No Hit
GTATTTATACTTCATGGCTCAGACACCTACCTCATTTGGCTCTATTCTCC10.6535947712418301No Hit
GATTAGAAGCAAGCCATGGGTCCTGCCTACACTCCAGGGGAGAGGAGATT10.6535947712418301No Hit
CATTTGAAGAATTCGATCTTTCCCCTGAATTATTAAAGGCCTTAGAAAAG10.6535947712418301No Hit
GCGCCATATCGACGGCCACCAGCACGGCCTGTTCGTCGTGCTGAAGAACA10.6535947712418301No Hit
CTATGTAGCAGATGATGAAGAACTCTTCTTCCCACTGGCACTTTGCTTTA10.6535947712418301No Hit
ATGTTTATTTTTCAGGCAGAGTAATTTTTCTGTAAGACACTGGTTTTCAG10.6535947712418301No Hit
GCAGAAAATGGAAGAGACGCCCCTGCTAACGGGAATGCTGAGAATGAGGA10.6535947712418301No Hit
GAATGGAATGGAATGGAATGGAATGGAATGGAATGGAATCAACTCGATTG10.6535947712418301No Hit
AAGCTCGCTTGATCTTGATTTTCAGTACGAATACAGACCGTGAAAGCGGG10.6535947712418301No Hit
CCGAAGATGATTCCATTCGATTCCGTTCAATGATTATTCCATTAGAGTCC10.6535947712418301No Hit
GGGTCAAATTAAGCCGCAGGCTCCACTCCTGGTGGTGCCCTTCCGTCAAT10.6535947712418301No Hit
GTGAGCCATGTTTGTACCACTGCACTCCAGCCTGGGTGACAGAGCAAGAC10.6535947712418301No Hit
GCTTATTTGGATAGTCTCTCTTCTTTTCTTGGTTAATCTCATTTATCTGT10.6535947712418301No Hit
GGTAGAAATAAATAACAAATTTACAAGAAAAAAACAAACAACTCCATCAA10.6535947712418301No Hit
AGGGCAGTCATGCCCTGTTTGCAGTAATTTTTCTTTTTATCATTTTGTTT10.6535947712418301No Hit
CCTTTAGTTTGAGAATCCCAATCCTAAAATAACCGTGTATACATTCAAAA10.6535947712418301No Hit
TCCCACAATAGACCATCTGCAAGCTGAGGAGGAGCAAGGAAGTCAGCCCA10.6535947712418301No Hit
TCGGGCGACTGGACGCTTTCGTGCGTGCGCGGCCAGGTGCGCAGCATCAC10.6535947712418301No Hit
TTTCTGGAAAGCAAGAAGGAATAGAAATCCTAAACAGGCCAATAATGAGT10.6535947712418301No Hit
GTAGTATATTACCTTACTTAGTATGGCACAATTTTCACAACCAAGGGGCT10.6535947712418301No Hit
ACGCCAGCTGATCCATCAACTGCAGGGTCTGAAAAATATCTTCAGCACCA10.6535947712418301No Hit
GCCCCGGACATCTAAGGGCATCACAGACCTGTTATTGCTCAATCTCGGGT10.6535947712418301No Hit
GAAGAAGATAGCAAGTGGGAGAAGGAAAAAGAGGGTAACTAGCGGGAGGA10.6535947712418301No Hit
GTTCCGCGGATGCCTTGCTCTTGATCAGTGGCAGCGGAGCCAATTCGGCG10.6535947712418301No Hit
GTGTTGGTGTGATTTTCCAGCATATGCTGATATACACACAAAAAACCGTA10.6535947712418301No Hit
CCTGTAGTCTCAGCTGCTCTGGAGGCTGAGGCAGAGGAATCACTTGAAAC10.6535947712418301No Hit
GCTGGTATGTGATAGTAGTCTGACTGTATTCTGAGAGTGGAAGTTTTCAA10.6535947712418301No Hit
GTTTAAAAAGGCTATTCGTAATTTTACAAAGGATTTAGATATTACAGAGG10.6535947712418301No Hit
CACTCACTCAGGCTAGGACCATGGAGACATGCCAGTTCACCTAAAATGTA10.6535947712418301No Hit
CCCTCACTGACACCAGCCTGATGGGTCTGAAGAAGGACTGTCACAGTCAG10.6535947712418301No Hit
GGTTCTGAGAATGCTTCCGTCTAGATTTTATATGAGGATATTCCCGTTTC10.6535947712418301No Hit
CTGTTGAACGAAGGTGACCGATTGAAAATGGTTTAGCGATATTAGGGCTA10.6535947712418301No Hit
GTCTTCAGCTGACCTGCTTAGTAGTCCGTAATTTCATCTCCTTATTCCCT10.6535947712418301No Hit

[FAIL]Adapter Content

Adapter graph