FastQCFastQC Report
Tue 10 May 2022
EGAF00003674127

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00003674127
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences424151
Sequences flagged as poor quality0
Sequence length146
%GC52

[OK]Per base sequence quality

Per base quality graph

[FAIL]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[OK]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[WARN]Overrepresented sequences

SequenceCountPercentagePossible Source
CAATAACACGGCACATAAAAAAGATTAAATTAAGAGAAGGGACAGGAACT7590.1789457056567119No Hit
CTCCTGGACCCAGGATTCACTGGGATCAGCACAGACTTGCTTGCTTCTTT5270.12424820405940339No Hit
GGACACAGCTGGGTTCTGAAGCTTCTGAGTTCTGCAGCCTCACCTCTGAG5240.12354090878012783No Hit
GTCCTGTCTCTCCTCATGCTAGTAGCTGCCTTCTGCTCTCCAGCGCTCTC5150.1214190229423012No Hit
TCCCCATAGGGGACACTTATCCTTTGGCTAAACTAATATAAATAATGGAA4920.11599642580118874No Hit
GTATGGAGGAGATGTGTCTCATGGAGAAGCATCCGGGCTCAGGTGACCTT4700.1108095937531681No Hit
TTCTTACACCGCGAGGAAGCTTCCTCGCAACTTTGTGGTAGATTACTATG4650.10963076828770886No Hit
CCTCTGAGAAAACCTCTTTTCCACCAATACCATGAAGCTCTGCGTGACTG4360.10279358058804529No Hit

[OK]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)