FastQCFastQC Report
Thu 1 Sep 2022
EGAF00003674133

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00003674133
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences137
Sequences flagged as poor quality0
Sequence length146
%GC48

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[FAIL]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[FAIL]Overrepresented sequences

SequenceCountPercentagePossible Source
CAAGGTTGCCCGGATAGACGCGGCTGTTGAGCTTGCGCTCGTAGATGCGG53.64963503649635No Hit
GGGATCAGCGCGCTCCATTGGGTGGCCTCGACCGTCGGGGTGAAGCCCTC42.9197080291970803No Hit
GCGCGGCGCGCACCGCGCCGGCCGTATCGCGCACCGGCACGGCCACGGCC32.18978102189781No Hit
GGCTCATTAAATCAGTTATGGTTCCTTTGGTCGCTCGCTCCTCTCCTACT32.18978102189781No Hit
AATAAGACCGTTACGCAGCGCATTGAGAAGAGGAAGCGGTTTTTCTTCAC32.18978102189781No Hit
GTTAAATGACAGGTTAATGGGTGCAGGACACCGACATGGCACATGTATAC32.18978102189781No Hit
CTGTGGGACAGTACTACCTGTAGGACAGTGTGCGACGAGCCTCAAAGATC32.18978102189781No Hit
GAAGCAAGGGTTAAAAAACTACCTATTGGGCCCTTTTCACAAGATGGCGC32.18978102189781No Hit
CATATAGGCAAGTAGTCGCTCGCGAAAATCGGCTGGCTCCAGCATGCGAA32.18978102189781No Hit
GAATCATCGAATGGACTCGAATGGAATCATCTAATGCACTCGAATGGAAT32.18978102189781No Hit
CTTTGTGATGTGTGCCTTCAACTCACAGAGTTTAACCTTTCTTTTCTTAG21.4598540145985401No Hit
CCCAAGGTGCTGGGATTACAGGAGTGAGCCACCGTGACCGGACGAAACTT21.4598540145985401No Hit
CGTTTATTGTAAGCCGTCAGCATCGGGATATCATCTGCTTCAAGCTCCTC21.4598540145985401No Hit
CCCTTATTTTATAGAAGAGCCCCAGGAGACTGGCGGGGTGGGGACAATGG21.4598540145985401No Hit
GTCATAAAGGTACTCTCAACTACGCAGTAGCGCCTTCTGTAGCGAAAGAA21.4598540145985401No Hit
CGCTTATAGAGAGTAAACCTCGTAAATTCTTCTGTAGCGAAAATGTGAAT21.4598540145985401No Hit
TTCCCTATTAGTGGGTGAACAATCCAACGCTTGGTGAATTCTGCTTCACA21.4598540145985401No Hit
CAAGAGAGGCAACTCCCAGATAAGGGGATACCGTAAGGGCATCACATGCA21.4598540145985401No Hit
TCACGATCCTTCTGACCTTTTGGGTTTTAAGCAGGAGGTGTCAGAAAAGT21.4598540145985401No Hit
TCACCGTGCCAGACTAGAGTCAAGCTCAACAGGGTCTTCTTTCCCCGCTG21.4598540145985401No Hit
AGATTAAACCGATGTGATTAAAAGACCTTGAAATCCATGACGCAGGGAGA21.4598540145985401No Hit
ATCTCCAAGGGTCCCTAACCCATAGGTGAGAATCTCATGAACTGTAGATT21.4598540145985401No Hit
CAGTCAAACAGAAGATGACATAAGAAAACGAAACTTCACCGGGCACAGTG21.4598540145985401No Hit
GCCCCAGGGCTGGGGCTGCCAGAAGTTTTTCCTTTAACTCCTGAAAGCCT21.4598540145985401No Hit
CCTTGCAAGCGATATACCTCTTGTACTTCTTGGACAATATAGCGCGTTAG21.4598540145985401No Hit
GTTAGGTACTGTTTGCATTAATAAATTAAAGCTCCATAGGGTCTTCTCGT21.4598540145985401No Hit
GTTATTTCCTTTACTACAGTAGGCCTCAAAGCAGTCCAAATCTCCAATCG21.4598540145985401No Hit
ACTCCTGGTGGTGCCCTTCCGTCAATTCCTTTAAGTTTCAGCTTTGCAAC21.4598540145985401No Hit
TTGAATAGCAGCTTGCAGAGTGATTTTCCGTATGTTACTTCAGTAATCCT10.7299270072992701No Hit
CTCTATACTTCTTTATTAGTCTTGCTAGCGGACTATCAATTTTGTTGATC10.7299270072992701No Hit
GGAGTCTAGCTTGTTGCCCAGGCTGGAGTACAGTGGCATGATCTCAGCTC10.7299270072992701No Hit
TATCTGCACATGGGATTTAACACCCTGCCAAGGATCCCAGAGAAAAGGGA10.7299270072992701No Hit
GTATAACACATAAAACAAAATTGTTCAGGACAAGCAGGATATACGATCAC10.7299270072992701No Hit
TACGGTAACAGGACGCATTGCTAGTAAACCCCAGCATGGTCTTACCGGTA10.7299270072992701No Hit
TTCGCCGTCAACGCTCTGGCCGACCATGACCAGAAGAACGTCATCACCGC10.7299270072992701No Hit
CAATAGAAAAACCCAGAATCGGTTCTTCGTGGTAGTTATCACCGATCTGC10.7299270072992701No Hit
CCTAATTACCTCCCCAAGTCCCCTCCTCCCAATATGATTACATTAAAGGT10.7299270072992701No Hit
CTTCTGGTCAGTCCCTTTCATTCCAGCTTCAGTTCATTTGGGGAGAGTGG10.7299270072992701No Hit
ACATTACGCTAATGACATTGTGGCAACGGATCTTTCACCACGGTGTTGTG10.7299270072992701No Hit
GTATTTGTCCCAATGTGCTCAGCATTTCCTTCATGAGACATTTTTATCAG10.7299270072992701No Hit
TAATTGCACTGGGTCTAACTGTGGTGAATATGACGATGGTGAAGATGACA10.7299270072992701No Hit
GTCTAGTATGCAATGCAATCGACTGGCAGGGAGTCAAAAGGAATGTAATC10.7299270072992701No Hit
GGGTCCTTTGTCACCCAGGCTGGAGTGCAATGGCGTGATCTCAGCTCACT10.7299270072992701No Hit
GTCTGTTTGCACGCATGTGCCCTGCGTGTATTCTCTGCCGGGGCATTAGC10.7299270072992701No Hit
GTGTGACCCTGTGTTTGCCACCCGCCCTCTCTGGACCATGATCTCATCTG10.7299270072992701No Hit
GCTTTATAATTCAAGATAAGGTTGAAACGATTGTTGTGAAATTGATGTTT10.7299270072992701No Hit
GTACTAGAAATCCTAGCCAGAGCAATCAGGTAAGACAAAGAAATTAAAGG10.7299270072992701No Hit
CCATATTGCAGGGAGGGATCATACAGCGGGAGAAGGATCGCTGCCTGATC10.7299270072992701No Hit
GCCAGGGGCACAGGTAGGCAACATGGATGGGAAGAGAGCCCAGGCCGCCC10.7299270072992701No Hit
CGCTCGTCGATGTCGGAGGTCATGAGGGTCGCAGCCTCGGCGTCGGTACG10.7299270072992701No Hit
AGATTTAATAAGTGGAAAATCTTGGAATAAGTATAATTATCATCCAGCCT10.7299270072992701No Hit
GTTTTTTTCATGTCCCGCATAATCCTCATTTGAAGAATCAATTAAATGCA10.7299270072992701No Hit
CAGTATAAAGTTCAAACATCTTAGCCTATGAGGGTCCCTCCTCCCCAAAT10.7299270072992701No Hit
GGTCTTACTATTGCACTCCAGCCTGGGTGACAGAGGGAGACTCCGTCTCA10.7299270072992701No Hit
GATCACCATAACTCAAATGAATGAGGTATACAAGGAAGTATTGCTAACTG10.7299270072992701No Hit
GCCAAGTTAAGTAGTGTGTTGAGTGGCGTGGCTCATTTTATTTTCTGGTG10.7299270072992701No Hit
TGGTAAACCAAAAGCAGTTATTTTTGATGTTGATGGTACACTAGCTAAAA10.7299270072992701No Hit
CTCTCACCTGGACTGCTTTTTATGCACACTTCTTCTGGCAGTTTCTGGAT10.7299270072992701No Hit
AGGTAATATCGCCCGGCCCCCAGGAGGCGCGCCGCGGTCTCGTGATGGGG10.7299270072992701No Hit
GACGAAGGCCAGGGGAGCACCATCGAGGATGTTAGCCCACTTTTCCGCGG10.7299270072992701No Hit
GCCCGCAGGGCCGGCGGACCCCGCCCCGGGCCCCTCGCGGGGACACCGGG10.7299270072992701No Hit
TCTTTTACTTCCTCAAGCGTTGAGCGGAATGCAGCAATCAATGTCGTCGG10.7299270072992701No Hit
GTTAGTTGAGTAGATACAGCATAAACATGTTTCTGAGATTACTTCTATCT10.7299270072992701No Hit
TCGTTATATTGATGCTTTCCTCCGTGATACCGAGTACCACCCGGCTCCGA10.7299270072992701No Hit
GGTATTAATCATCAGGTTTTACCACGGGCCCGCAGGTGTGGGGCATGTTG10.7299270072992701No Hit
GTTTTTATGGGAAGATATTTCCTTTTTCACCATAGGCCTGAAAGCGCTCC10.7299270072992701No Hit
CTTAAAAGAAAGACAGTATCAATATGAAAATGAAAAGGCAGAAAGAGAAG10.7299270072992701No Hit
CCGTTATGATGTTACTTTTGCCCACTGTTACAACAGAAGGGCTTTTTTTT10.7299270072992701No Hit
GTCATACACAATGTTTAAGTATTGGTTACTACTGGTTTACCCAAATAGTT10.7299270072992701No Hit
GCGAACCGCGTGGCGTGAACATGCCAACCCCTATCTTTGTTATAAATACG10.7299270072992701No Hit
TCATACGCCTGCCGGGCCGCCAACCGATCACCGATGCCAGGCACGATGCG10.7299270072992701No Hit
GACAAGGACAGATGAGCAGGCATTTGAGGGTGGTTGCCCCAAAAGGAAGT10.7299270072992701No Hit
GTGGAGATGATAGGAGCGGAGTGGAGTAGAGTGAAATGGAGTCGAATGGA10.7299270072992701No Hit
GAAACCTGAGCCTCAGAAATTGGCGCTTAGAATGTGTAGTCCTACATTGG10.7299270072992701No Hit
GATAGGGTCTCATTCTGTCGCCCAGGCTGGAATGCAGTGGTGTGATCATA10.7299270072992701No Hit
GATTGATTCCACATTCCACTTCCTAGATCTAGTTTAGAAAACATGTTCCC10.7299270072992701No Hit
GAGCCATGTTGACCGAGGGACTTGGCAACGCGTGAGACACCCGCGGCCCC10.7299270072992701No Hit
TCACTTATGACTGGACATTCTCTCAGCTCTTTCAGATCTTGCTCCCTGGG10.7299270072992701No Hit
GGGCTTAAGTGATTCTCCCCCCTTCACCTCCCAAAGTGCTGGGATTGTAA10.7299270072992701No Hit
CCTCTTGAATGGTTTGCTGCTTAGAAATTTCTTCTGCCTGGTACCCTAAA10.7299270072992701No Hit
GTTGGAGGAGCCTTCAGTTCACTTTCGTTGAGGAGGTCGAGGGAACATTA10.7299270072992701No Hit
TAGGTTAGCTGAGCGGATGACCACACGAGAAAAGAAGGTTCTGGAAGCAG10.7299270072992701No Hit
ATGTTAGCCTCATAAAATGAGTTACAGATAAGTCCCTCCTTTTCACTTGC10.7299270072992701No Hit
TTATCATGCTGCATGCTTCTCCTGTTCTATTTCATTTGATTTTTCCAAAA10.7299270072992701No Hit
ACCCACAGCCAATGGTGGCAAAATGAAAGGGAAAAAGCTGGAAGCATTCT10.7299270072992701No Hit
CCTTGGTAGTTGGAACACAGGCATGAAGCCCAGGATCTGCCACTAAGATG10.7299270072992701No Hit
ATTCTTTACCTCCAGATCTAGGCATTAAGTCAACCCCTGCTTCCCTATGT10.7299270072992701No Hit
ATTATGCCCTGACTTATATTCTAACCCATTCATCATGATTCTGGGTTATT10.7299270072992701No Hit
TCATAATCCAATGGGTATCCGTTTGAGGCTACAACAACGCCTAGTGTTAC10.7299270072992701No Hit
CTCTTGAAGCAGTTAAAGTAATTGATGTTGGAGTATGCTGAAATGCAGTA10.7299270072992701No Hit
CCCTCCTCTGCCTGTTGTTCCCATCTTTATGTCCATGCATAACCAATGTT10.7299270072992701No Hit
CTACTTATCACCTGGGCTTCAGGTTCCTCATCTGTAAAATGGGGATAAGA10.7299270072992701No Hit
CTATTAAAACTAAGGCTGCTATTAAAGACTCGGCACGTGTCCAATTCGGG10.7299270072992701No Hit
ATTCGATTACATTCGATGATTATTCCATTCGAGTGCATTAGATGATTCCA10.7299270072992701No Hit
CCCTTACAAGAGTCCACTGTGGGCCAGGCGCGGTGGGTCACGCCTGTAAT10.7299270072992701No Hit
CATTAAAAATATGGAGACTTCTTCTATCACCGTAGAAAAAATGCAAGTTG10.7299270072992701No Hit

[OK]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)