FastQCFastQC Report
Thu 1 Sep 2022
EGAF00003674143

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00003674143
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences74
Sequences flagged as poor quality0
Sequence length146
%GC45

[OK]Per base sequence quality

Per base quality graph

[FAIL]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[FAIL]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[FAIL]Overrepresented sequences

SequenceCountPercentagePossible Source
GAGTGCCGCCGACGACGAGTGCAGTCACGCTGACCGCCACCACTTTTGTA56.756756756756757No Hit
GATGATTCCATTGGAGTCCATTCAATGATTCCATTCGATTCCAATCGATG34.054054054054054No Hit
CAAGAGGGCACTTCAGGGAGAGAGAAGATAATGATCCAAGATGAGCATGT22.7027027027027026No Hit
CAGCATCAGGCTCTTGGGGTTCTTGGGCTCGATCTCGATCAGCGGCTACC22.7027027027027026No Hit
CTATTATGGAAAAGGAAATATCTTCATGTAAAAACTACATAGAAGCATTC22.7027027027027026No Hit
GGGGATGATTCCTGCCTTGTAGGATGCTTGTGAAACATAATTGGGAAAGC11.3513513513513513No Hit
GGGTTACCATGGCAACAACACATCATCAGTAGGGTAAAACTAACCTGTCT11.3513513513513513No Hit
GTATTCGACCGCCGGCGTGATCGCGTTCGGCTTCATCAATTGCAGCGCCT11.3513513513513513No Hit
TCCCAACCCCTTCTTCATTGTCCACGTGAAATCTACCCCTCAAGATGAAG11.3513513513513513No Hit
TCATCAAATGAAGTCAAATGGAATCACCAAATCGACATGAATGGAATCAT11.3513513513513513No Hit
ATATGATGCTCCATGAATGATAAATTTCATAAAAGGTGTGTGAATGATTC11.3513513513513513No Hit
GAACTATGTGTCCTTGCTTTTCCAAAGCTTTAATGAAGTTATCTGTAATC11.3513513513513513No Hit
CTCATGTAGCTACATCTGGGGAAGACCTCAGTCAAAGTTTAATAGTATAT11.3513513513513513No Hit
GTTATGGAGACAGTTTCTTTCCTTAAACCTCATAAGCAGAGCTGTGCTAG11.3513513513513513No Hit
ATTGGTATTGAATGGAATTGTCATCAAATGGAATTCAAAGGAATCATCAT11.3513513513513513No Hit
CATACAAAGTTGAGTGAGCAGACTTGTTTGCCTCTTTTCATTTTTTGTTA11.3513513513513513No Hit
GTTTTAGAATCAAGAATATGGAGGCCAATTTTATTTTGAATTTTTCAAAT11.3513513513513513No Hit
GTTTCTGAGAATGCTTCCGTCTAGATTTTATATGAAGATATTCCCGTTTC11.3513513513513513No Hit
CTTCTCCACAAAAAGAGTAATGGGATATCCAATAAACTGAGAATGTTTCT11.3513513513513513No Hit
CTTTTTAACTGCAGCAACTTTAATATACGCTATTGGAGCTGGAATTACCG11.3513513513513513No Hit
GTTTGCTAGTTTCCTTTTGGAAATTTTTGAGAAATTAATGTTGCCTGAAG11.3513513513513513No Hit
GTCCCCATGTATCCCCGTGAAGGTGTGATGCTGACAGCACAGCATCCTTT11.3513513513513513No Hit
GGAAAGGAATGGAAAGGAATGGAATGGTACGGAATAGAACGGAATGGAAC11.3513513513513513No Hit
CGTTGCTTACTCTCTGACTATCCCTCTGTTTTTTCCCCACTCTTACCCTT11.3513513513513513No Hit
GGCTATCTTAATGCAGGAAGCAGGGGGCACTGGTTTACATTCTGGCACAA11.3513513513513513No Hit
TTACAGGAGTCTGTCCCCCTCAGTCTCTGGCTGCAGGAGAAATTTCTGTG11.3513513513513513No Hit
CTGTGAGTTCAATGCACACATCCCAAAGCAGTTTCTGAGAATGATTCCGT11.3513513513513513No Hit
GAAACCCTGTCAAGGGTATAACATAGTAGGTGTTGATGTATGTTGGCTAT11.3513513513513513No Hit
GCAGCACTCCACCTCCTATTCTTGCACGAAACGGGATCAAACAACCCCCT11.3513513513513513No Hit
CTCATGTAGCTACATCTGGGGAAGACCTCAGTCAAAGTTGAATAGTATAT11.3513513513513513No Hit
AGCCTAAGCAGGTAAGGATTCTAGGACTCAAATTCTGCTGAAATTCTCCC11.3513513513513513No Hit
GTTCTGCTCTGACTCCAGGTTGGGACAGCGTCTTCGCTGCTGCTGGATAG11.3513513513513513No Hit
ATTAAGGACTAGTTAGAAGCAGAGGCTAGATGTGTTCTCTCCAGCCCTTA11.3513513513513513No Hit
GTTAATATAGATTCCCCTGGTATCGTCTCCAGATGATAAGGGTCTAAAGT11.3513513513513513No Hit
TTCTGGAAGTGTCGGCATTCATCAGCCTGCATGTGGCTCACTTTTCTTTC11.3513513513513513No Hit
GTGGAGTGCAATGGCGCTATCTCAACTCACCACAACCTCCGCCTCCCGGG11.3513513513513513No Hit
GTATTCGACCGCCGGCGTGATCGCGTTCGGCTTCATCAATTGCTGCGCCT11.3513513513513513No Hit
CCATCCGAGGACTTAAGCCAGTTTTGAATTTGTAAGCCCTGAGTACAATA11.3513513513513513No Hit
GACAGAAACCTCCCGTGGAGCAGAAGGGCAAAAGCTCGCTTGATCTTGAT11.3513513513513513No Hit
AGCCAGAAGGATGCCTGCAGGTGTTGGTCGAAATCATTCCTGATGGCAAC11.3513513513513513No Hit
GCGTGGCGGGGGTGCGTCGGGTCTGCGAGAGCGCCAGCTATCCTGAGGGA11.3513513513513513No Hit
CGTTGCTTACTCTCTGACTATCCCTCTGTTATTTCCCCACTCTTACCCTT11.3513513513513513No Hit
GCTCATCGACGACGAAGCGGATATCCGCGAAGCCATGGTCGGCCTGTTCA11.3513513513513513No Hit
GAATAGAATCGAATTGAATCAACATCAAATGGAATCGAATGGAATCATCC11.3513513513513513No Hit
GCTGAAGAGGCCTGCTGCTTCTTTACAGTTACTACCAAGGCTAAACCCTT11.3513513513513513No Hit
GATCTAATGTGGAAGTTTGGAGATCAACTCTTACTCTTATTATTGTGGGT11.3513513513513513No Hit
TTTGAAACCTTCATCAATCTTTCCAAGGCCTCTCTTGTGAGGTGTCCAGG11.3513513513513513No Hit
GCCCAGCGCCGCACACCATGCAAGGAGTTGCTCCACGCTCAGCTCGTGGG11.3513513513513513No Hit
GTATTATTATTTCCTTCAAGAACTTTTCCTTTGCATTATGTACTATTATT11.3513513513513513No Hit
CCATAGGGTCTTCTCGTCTTGCTGTGTTATGCCCGCCTCTTCACGGGCAG11.3513513513513513No Hit
GGTCTGCTCTGACTCCCGGTTGGGACAGCGTCTTCGCTGCTGCTGGATAG11.3513513513513513No Hit
CGCCAGCAAGGTGCAGCAGTTGCCGGCCTGCAAGGAGAGCCTCGAAGCCA11.3513513513513513No Hit
GTCTTGACCCCATTTGGGCAGCTCTCTAGGCCTTCTGCATGGGCTTGGCC11.3513513513513513No Hit
CATTAGGGTTGCTGCGAGGATCCAACGAGATAACCCACTTGAAGCACTTA11.3513513513513513No Hit
GAGCGAGACTCTGTCTCAAAAAAAAAAAAAAAAAAGAATGTATCCAGTTA11.3513513513513513No Hit
CCATCCGAGGACTTAAGCCAGTTTTGGATTTGTAAGCCCTGAGTACAATA11.3513513513513513No Hit
TCTAGTGACATTATGAGTGGCAAAATTTGACGAAAAATGATTTTCTATTC11.3513513513513513No Hit
GTCAGCGCCCGTCGGCTTTGGTGACTCTAGATAACCTCGGGCCGATCGCA11.3513513513513513No Hit
AGCCAGCAAGGTGCAGCAGTTGCCGGCCTGCAAGGAGAGCCTCGAAGCCA11.3513513513513513No Hit
GTTTTACTTTGGTACTTGCAGACAATGGATTATTATTCAGCACTAACATA11.3513513513513513No Hit
CTTTGCCTTCCATTCGAATCCATTCCATTCTAGTCCATTCCATTTGAGTC11.3513513513513513No Hit
GCACATACACCAAATGTCTGAACCTGCGGTTCCTCTCGTACTGAGCAGGA11.3513513513513513No Hit
GTATGGATGTTTAGTAAATGGTTAAGAATGATGATCCAGTTTTTCATCCA11.3513513513513513No Hit
AATCAATAGTTTACCAACCAAAGAGTCCAGGACCAGATGGATTCACAGCC11.3513513513513513No Hit
GGGTGCACTGTTAAGCTGAATTGCAAATTATGGCAACACACACTGGACTG11.3513513513513513No Hit

[OK]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)