FastQCFastQC Report
Thu 1 Sep 2022
EGAF00003674151

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00003674151
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences116
Sequences flagged as poor quality0
Sequence length146
%GC47

[OK]Per base sequence quality

Per base quality graph

[FAIL]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[FAIL]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[FAIL]Overrepresented sequences

SequenceCountPercentagePossible Source
CTCTTCTGGCTTGTACAGTTTCTGCAGAAAGATCTGCTGTTAGTCTGATG32.586206896551724No Hit
GGAACCTGCGGTTCCTCTCGTACTGAGCAGGATTACCATGGCAACAACAC32.586206896551724No Hit
AATCGAATAGAATCATCGAATGGACTCGAATGGAATCATCGAATGGAATG21.7241379310344827No Hit
CTAATGGAATCATCAAATGGACTCAAATGGAACCATCGAATGGACTCGAA21.7241379310344827No Hit
ATAATGGACTTAGTTACTGTGCAATCAAGGACAGGTTACTACTAAGAAAA21.7241379310344827No Hit
GTGCTGCAGTGCTCCTCTCCGAGAGTTGCCTTTTTATTGAATATCTTCCA21.7241379310344827No Hit
ATGGAATAGATTCGAATGGAATCATTGAATGGAATGGAATGGAATCATCA21.7241379310344827No Hit
GTCTGGGAACACCCGGCTGACCAGCCCACTGCCCAGGGCCTCGTCAGCCA21.7241379310344827No Hit
CTACTAGAGCTACCACCAGGAATCCCCACATGACATGGGCTCTGGCCGGC21.7241379310344827No Hit
GGCTATGCCCGCTGGGCCACCGGCTGGACCAACAGCCTGCTCGCGCCCCC21.7241379310344827No Hit
GAAACTTACTCGTGATATGTGTCCTCAACTAAAGGAGTAGAACCTTTCTA21.7241379310344827No Hit
AGCATGTGTAGTGCGCCATATCATATCCAAGATAGTGTAGGACTCGTCGC21.7241379310344827No Hit
GGAACTAACACTGTGACCATCAGAGCCAGAATCTCTGGCAAACTTCACCC21.7241379310344827No Hit
GTGATGTGTATTGTTTATATATTATATGGCATACTCTGGCTGACGTGGTC21.7241379310344827No Hit
GGAATGTCTAGGATTTCCATGCATGCGTGAAACTGTGGATAGTACTGAAC21.7241379310344827No Hit
GGCCTTTTCTGCATCTATTGAGATAATCATGTGGTTTTTGTCTTTGGCTC21.7241379310344827No Hit
GGAATTACCGCGGCTGCTGGCACCAGACTTGCCCTCCAATGGATCCTCGT21.7241379310344827No Hit
GGTTTCAGGGGAAACAGGTAACTATTATCTCTAGGGAAGGGAACTCAATA21.7241379310344827No Hit
CAACAGTTGATCCTAAAAACAACCTATCAAAGCTGGCTTTCTATTTTAAT21.7241379310344827No Hit
CAGGTGGTGGATGTATTGGTGTTTCTACAATTCTTCCTTTTTTTTTCCTT21.7241379310344827No Hit
AAGTACAGCGCCAGCGTCGGGACGGCGACAAACGCGATCTCACACAAACC21.7241379310344827No Hit
GTCGCACACCCTGCGACGATGACCCATGCAGATATGGGTGATGAGGCCCG21.7241379310344827No Hit
TTCCATTGCATTCCATTCCATTCCATTCCATTCCATTCCATTCCATTCCG10.8620689655172413No Hit
GGTGGTGGGCGAATCGGGCTGCGGCAAGTCGACGCTGGCGCGCATGGTCG10.8620689655172413No Hit
GGGAAGAGCCAGAACACGGCGAGGCCTGCGCCTGCAATCAGCGCGGCATC10.8620689655172413No Hit
TATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT10.8620689655172413No Hit
AAGGTTGGTCAGTTCTATAGATAACTGCCTTTCTTCCACAACATGCTTGA10.8620689655172413No Hit
TTCGAGACCAGCCTGGCTGACGTGGCAAAACTCCGTAATACAAAAAATTA10.8620689655172413No Hit
GCTCGGCCTGCTCGCTCTCGTCGAGGCTCCAGCGCGTGAACACGACGGGC10.8620689655172413No Hit
CCGCGAAGTTGCGCCAGATCTTCCGCCAGCGCAGTAATCGGTCCTTTCAG10.8620689655172413No Hit
TTCCATTGCATTCCATTCCATTCCATTCCATTCCATTCCATTCCGTTCCG10.8620689655172413No Hit
CATGTCGGTGGGCACCATCTTCGCCATCTTCCCCCACCCCGCCGGCGCGG10.8620689655172413No Hit
GTCATCATCTAATGGACTTGCATGGAATCATCATAAAATGGAATCGAATG10.8620689655172413No Hit
CAGTGACATGATGCCTTCATAAATTAAGGAAACTGGCCACCCGTCACAGC10.8620689655172413No Hit
GTATCAATTGCTGCAGTCAATGCATATGTGAGGACAAAGGGGCAATTACT10.8620689655172413No Hit
CTCCGGGGACAGTGCCAGGTGGGGAGTTTGACTGGGGCGGTACACCTGTC10.8620689655172413No Hit
GTTAGGTCCACGTTTTGGAGGTTTGCTTTTTTTTTTTTCTTAAGCCTATG10.8620689655172413No Hit
GCTTGCAGGACTATCGCGACGTGACAGGCCAGTTCGACCGCATCACCAGC10.8620689655172413No Hit
AATGCAATCATCATCGTGTAGAAGCGAATGGAATCATCGAATGGACTCGA10.8620689655172413No Hit
CTACCGTGCCGCGCCACATCGGCGAGACCCTCGCGAACTCGAATCCCGGC10.8620689655172413No Hit
CTATAGCTTGCTGAATACTGAATACCATACTGTTGAGGCTGCTGAGGTGG10.8620689655172413No Hit
CCCTAATGTGAGTAGTCCTTACTCCATCAGTTGAAGGCCTGAATAGAACT10.8620689655172413No Hit
GTTGCAGGGAGGAAGTCACATTTTGTGGTGCAACTTGTTGGCTTACGTGC10.8620689655172413No Hit
GAGCAGGATTACCATGGCAACAACACATCATCAGTAGGGTAAAACTAACC10.8620689655172413No Hit
GTACAAAGCAATAGAAGAAGGAGCCAATCACATGTGGACTGTTTCCGCTT10.8620689655172413No Hit
AATCCTGAAAGGTATTATTATCATCACTTTATAGTTAATGAAACTGGGTT10.8620689655172413No Hit
CAATAAATACTAAACAGGGGCAGCAATTTCGTTTCCTGTCTAGTCAGGGT10.8620689655172413No Hit
TCTTTATCTCTCTCTTAAGCCCCCATCAAGATCCTGCCTCTCTAAGCTGA10.8620689655172413No Hit
GGCCGCTGGGCGTCGGCAAGCTCATGCGCTCCGTACGTGCGGGGTTGGCC10.8620689655172413No Hit
ACTATGCCGTCTACACCGACGAGAAGGAGCCGACCTCGTCGGTCTCGCTG10.8620689655172413No Hit
GTAGAAAAGTAAATATCTTCGTATAAAAACTAGACAGAACGATTCTCAGA10.8620689655172413No Hit
GCTACGCCAAGTTTGAGCCGCCTTGGCGGAGTGGGAGCAGATCCGCTTTG10.8620689655172413No Hit
TTATAGCATTGAGATTCTGTTTCTTGCCTCAAGTATAAATCTTCCTGTTT10.8620689655172413No Hit
GCCGTCGCCATGACCCGCGGTAACCAGCGTGAGCTCGCCCGCCAGAAGAA10.8620689655172413No Hit
ATGCTTAGCATGTGTGTCCAACTCTTTGACAATTTCTTTTTAGTTTTCTG10.8620689655172413No Hit
CCATTGGAGTCCATTCAATGATTCCATTCTATTCCAATCGATGATGATTC10.8620689655172413No Hit
GGTCTCAGTACTCATCTTATTTGATACATCAGCAGCACTAGCAATGGCTT10.8620689655172413No Hit
AGGTCATACTTAATGTGCTTTGTGGGATTATCTGGTTTTGGCCCACATTG10.8620689655172413No Hit
AAACTAGACAGAAGCATTCTCTGAAACTTCTTTGTGATGTGTGAATTCAA10.8620689655172413No Hit
TTTCCGCCCCTGGCGCTCTAGGCTACTACGTGCGCGATATGACAAGTTAA10.8620689655172413No Hit
GTCTGGTTTCTTGATATCCTGAAGGAAGATTCGGCCACCTCGTTGGTTCT10.8620689655172413No Hit
GAACTCTTCATCTCAGTCATAACTGCATAGACTGTATTAACAAGTATATT10.8620689655172413No Hit
GCATGTTTGCATCCTTGTTTACTCATTTACATACTACAGCCTCACCTTGA10.8620689655172413No Hit
ATACAAGAGAAGCGATAAGGACTCTTCTCCCCTCAATATAATCTCAATAC10.8620689655172413No Hit
CAATAGTTTTCTGAACCAACTCAAAAGAGTGATTCCTGTAAACGGCCACT10.8620689655172413No Hit
CTTTAAGGCAGGCCTGGTGATGACAAAATCCCTCAGCATTTGCTCTGTCT10.8620689655172413No Hit
GCTGCAATATGCACTGCCGCGTCTGACGGGACAAGGGATCAACCTTTCCC10.8620689655172413No Hit
CATCTTCTTCTGATCCCTGAAACAATTGCATGTAGGATTTTAAATAAAAG10.8620689655172413No Hit
GTATAATCCCCTAATCTAGGGGATGATTAATTGTCCAAGCTTGCCTCAAG10.8620689655172413No Hit
CCACGAAATCCTCAAAGCTATGCAAATATCCTCTTGCAGATTCTACAAAA10.8620689655172413No Hit
ATACCTAGAAAACAGCCTCAAAAAGGAAAATCTAAGTTATTGGCCTTAAA10.8620689655172413No Hit
CTCCACTGATCTGTACCATGATATTAACTGTCTTCTGGAATTGGCTCCAT10.8620689655172413No Hit
TCCTGGTGGTGCCCTTCCGTCAATTCCTTTAAGTTTCAGCTTTGCAACCA10.8620689655172413No Hit
GCTGGCCCGTCGCGTTCACGAACTCGGCTGGCATGTGCAATTGCACTGGA10.8620689655172413No Hit
ACTCGGGTTGATTCCATTCCATTCCATTCCATTCCTTTCCATTCCATTCC10.8620689655172413No Hit
TTTGGCTACCTTAAGAGAGTCATAGTTACTCCCGCCGTTTACCCGCGCTT10.8620689655172413No Hit
ATTCTCATCACCCCAAAAGGAAATCCCATCAGCAGCCGCTCCTCCTTCTC10.8620689655172413No Hit
ACTCGGGTTGATTCCATTCCATTGCATTCCATTCCTTTCCATTCCATTCC10.8620689655172413No Hit
GACCCAAGCAGGTTGCTGCTGCTGGCTAGGGTGCCCAGCTTTTATTCNCT10.8620689655172413No Hit
CTTTAATAGCCTTCAGTGACTGTGAGATGCCGTCTACGAGTGGCACGAAT10.8620689655172413No Hit
TCCTAATGCCATACACTGAAAAGGACACAATGGCACCTCTAATGTTGCCA10.8620689655172413No Hit
CTGGAGTACAGTGGCACAATTTCAGCTCACTGCAAGCTCCACCTCCCTGG10.8620689655172413No Hit
CCACAAAAGCCTACAGCAGGCCGGGCGGGCGCGGTGGCTCGCGCCTGTAA10.8620689655172413No Hit
GCAAGCAGCAGATGAAGTGTTGTCTTGGAAATTCCCAGACGAGTTTCCAT10.8620689655172413No Hit
ATTTCAATGTTTTCAAGATTTCTTCCTTTAGTTTCAGAATTGTGATTATA10.8620689655172413No Hit
GGCATAGCTGTCTCCTTTGACTTGTTCGAAATCGGTTTTACCGGAGACTT10.8620689655172413No Hit
GTAAAGGCTTGTGATCTCAGGAATACAAAGGCAAAAATGCGCAGACTTGA10.8620689655172413No Hit
CTGTTTATCTGATGGTTGACTAACTCTCTCTTTGAGATGTCCCCCATATC10.8620689655172413No Hit
GGAAGATGGTAGGATGGAGATCTGACCACGGCATGGGGTGTCTCCAGTGT10.8620689655172413No Hit
GCAGAAGAACTGCCCGACCAGCAGAAGAACTGCCTGATCAACTACAGAAT10.8620689655172413No Hit
ATCGAAGGATCAAAAAGCGACGTCGCTATGAACGCTTGGCCGCCACAAGC10.8620689655172413No Hit
GTTCACTCTGATGGTAGTTTCTTTTGCTGTGCAGAAGCTCTTTAGTTTAA10.8620689655172413No Hit

[OK]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)